Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.23■□□□□ 0.99
CHMP6Q96FZ7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP6Q96FZ7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CHMP6Q96FZ7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CHMP6Q96FZ7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CHMP6Q96FZ7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.2■□□□□ 0.98
CHMP6Q96FZ7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 BX664725.1-201ENST00000438252 379 ntBASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 RARRES2P1-201ENST00000474487 481 ntBASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 AC087289.5-201ENST00000586076 3175 ntBASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CHMP6Q96FZ7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms