Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF31Q96EP0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF31Q96EP0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF31Q96EP0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF31Q96EP0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF31Q96EP0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF31Q96EP0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF31Q96EP0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RNF31Q96EP0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF31Q96EP0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF31Q96EP0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF31Q96EP0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF31Q96EP0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF31Q96EP0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF31Q96EP0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF31Q96EP0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF31Q96EP0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF31Q96EP0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF31Q96EP0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF31Q96EP0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF31Q96EP0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF31Q96EP0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF31Q96EP0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF31Q96EP0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF31Q96EP0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF31Q96EP0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF31Q96EP0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF31Q96EP0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 DUX4L16-201ENST00000555130 1264 ntBASIC20.31■□□□□ 0.84
RNF31Q96EP0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.31■□□□□ 0.84
RNF31Q96EP0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF31Q96EP0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF31Q96EP0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF31Q96EP0 MYCNOS-205ENST00000641950 531 ntBASIC20.3■□□□□ 0.84
RNF31Q96EP0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF31Q96EP0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF31Q96EP0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RNF31Q96EP0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF31Q96EP0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF31Q96EP0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 AC139530.1-201ENST00000575312 1977 ntBASIC20.29■□□□□ 0.84
RNF31Q96EP0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 KRT18P11-201ENST00000435214 1283 ntBASIC20.29■□□□□ 0.84
RNF31Q96EP0 NCF1B-203ENST00000435988 1254 ntBASIC20.29■□□□□ 0.84
RNF31Q96EP0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 SLC7A5P2-201ENST00000553010 536 ntBASIC20.29■□□□□ 0.84
RNF31Q96EP0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF31Q96EP0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF31Q96EP0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF31Q96EP0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF31Q96EP0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF31Q96EP0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF31Q96EP0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF31Q96EP0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF31Q96EP0 GPX1P1-201ENST00000388829 606 ntBASIC20.28■□□□□ 0.84
RNF31Q96EP0 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF31Q96EP0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.28■□□□□ 0.84
RNF31Q96EP0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF31Q96EP0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF31Q96EP0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF31Q96EP0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF31Q96EP0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF31Q96EP0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF31Q96EP0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF31Q96EP0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF31Q96EP0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms