Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 POU5F1P4-201ENST00000413175 1085 ntBASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 AC004911.1-201ENST00000416316 871 ntBASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 SLC7A5P1-201ENST00000568957 537 ntBASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 AC008175.2-201ENST00000612840 297 ntBASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ECHDC3Q96DC8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 MYCNOS-205ENST00000641950 531 ntBASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC3Q96DC8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.99
ECHDC3Q96DC8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
ECHDC3Q96DC8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 SLC7A5P2-201ENST00000553010 536 ntBASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 MFSD11-216ENST00000590393 1141 ntBASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 BID-214ENST00000617586 542 ntTSL 5 BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 AC061975.6-201ENST00000579045 1553 ntBASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC3Q96DC8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC3Q96DC8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 KRT16P2-201ENST00000414673 1423 ntBASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC3Q96DC8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms