Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 MIR939-201ENST00000401314 82 ntBASIC18.33■□□□□ 0.52
SLC25A28Q96A46 AC006455.2-201ENST00000429931 906 ntBASIC18.33■□□□□ 0.52
SLC25A28Q96A46 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A28Q96A46 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 AP001330.3-201ENST00000520123 633 ntBASIC18.32■□□□□ 0.52
SLC25A28Q96A46 pRNA.6-201ENST00000610482 90 ntBASIC18.32■□□□□ 0.52
SLC25A28Q96A46 pRNA.5-201ENST00000612139 90 ntBASIC18.32■□□□□ 0.52
SLC25A28Q96A46 pRNA.11-201ENST00000618423 90 ntBASIC18.32■□□□□ 0.52
SLC25A28Q96A46 pRNA.13-201ENST00000619112 90 ntBASIC18.32■□□□□ 0.52
SLC25A28Q96A46 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 AL049796.1-201ENST00000565336 1766 ntBASIC18.32■□□□□ 0.52
SLC25A28Q96A46 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A28Q96A46 LINC01006-201ENST00000333319 2292 ntBASIC18.32■□□□□ 0.52
SLC25A28Q96A46 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 AC026271.2-201ENST00000428091 497 ntBASIC18.31■□□□□ 0.52
SLC25A28Q96A46 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 MIR4767-201ENST00000582827 78 ntBASIC18.31■□□□□ 0.52
SLC25A28Q96A46 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 AC068587.7-201ENST00000641602 218 ntBASIC18.31■□□□□ 0.52
SLC25A28Q96A46 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A28Q96A46 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 AL138724.1-201ENST00000606771 1088 ntBASIC18.3■□□□□ 0.52
SLC25A28Q96A46 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 FEM1AP1-201ENST00000431297 1995 ntBASIC18.3■□□□□ 0.52
SLC25A28Q96A46 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A28Q96A46 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 AC027682.1-201ENST00000562846 899 ntBASIC18.29■□□□□ 0.52
SLC25A28Q96A46 AC099791.2-201ENST00000605725 427 ntBASIC18.29■□□□□ 0.52
SLC25A28Q96A46 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A28Q96A46 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC25A28Q96A46 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC25A28Q96A46 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A28Q96A46 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A28Q96A46 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A28Q96A46 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms