Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM54Q969K7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM54Q969K7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM54Q969K7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TMEM54Q969K7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM54Q969K7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM54Q969K7 KRT87P-202ENST00000534226 1464 ntBASIC18.68■□□□□ 0.58
TMEM54Q969K7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEM54Q969K7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM54Q969K7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TMEM54Q969K7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM54Q969K7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM54Q969K7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM54Q969K7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM54Q969K7 CCDC92B-201ENST00000575506 885 ntBASIC18.67■□□□□ 0.58
TMEM54Q969K7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM54Q969K7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.67■□□□□ 0.58
TMEM54Q969K7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM54Q969K7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM54Q969K7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TMEM54Q969K7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM54Q969K7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM54Q969K7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM54Q969K7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM54Q969K7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM54Q969K7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM54Q969K7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM54Q969K7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM54Q969K7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEM54Q969K7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM54Q969K7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.65■□□□□ 0.58
TMEM54Q969K7 KRT18P14-201ENST00000534205 1250 ntBASIC18.65■□□□□ 0.58
TMEM54Q969K7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM54Q969K7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM54Q969K7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM54Q969K7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM54Q969K7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM54Q969K7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.64■□□□□ 0.58
TMEM54Q969K7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM54Q969K7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TMEM54Q969K7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM54Q969K7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TMEM54Q969K7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TMEM54Q969K7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM54Q969K7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM54Q969K7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM54Q969K7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM54Q969K7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM54Q969K7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM54Q969K7 FEM1AP4-201ENST00000443167 1987 ntBASIC18.64■□□□□ 0.57
TMEM54Q969K7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM54Q969K7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM54Q969K7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM54Q969K7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM54Q969K7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM54Q969K7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM54Q969K7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM54Q969K7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
TMEM54Q969K7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM54Q969K7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM54Q969K7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM54Q969K7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM54Q969K7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM54Q969K7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM54Q969K7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM54Q969K7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM54Q969K7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM54Q969K7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM54Q969K7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM54Q969K7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM54Q969K7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM54Q969K7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM54Q969K7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM54Q969K7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 AC019069.1-201ENST00000610008 1333 ntBASIC18.62■□□□□ 0.57
TMEM54Q969K7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM54Q969K7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM54Q969K7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM54Q969K7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms