Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.66■□□□□ 0.58
USP9XQ93008 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.65■□□□□ 0.58
USP9XQ93008 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP9XQ93008 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.65■□□□□ 0.58
USP9XQ93008 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP9XQ93008 AC087499.1-201ENST00000418141 1075 ntBASIC18.65■□□□□ 0.58
USP9XQ93008 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.65■□□□□ 0.58
USP9XQ93008 AL355075.4-201ENST00000554988 638 ntBASIC18.65■□□□□ 0.58
USP9XQ93008 AL135905.2-201ENST00000584934 1404 ntBASIC18.65■□□□□ 0.58
USP9XQ93008 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 AL355472.2-201ENST00000422958 438 ntBASIC18.65■□□□□ 0.58
USP9XQ93008 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.65■□□□□ 0.58
USP9XQ93008 TSPY7P-201ENST00000431358 1114 ntBASIC18.65■□□□□ 0.58
USP9XQ93008 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.65■□□□□ 0.58
USP9XQ93008 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.65■□□□□ 0.58
USP9XQ93008 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 TSPY15P-201ENST00000457163 923 ntBASIC18.65■□□□□ 0.58
USP9XQ93008 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.65■□□□□ 0.58
USP9XQ93008 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.65■□□□□ 0.58
USP9XQ93008 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP9XQ93008 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP9XQ93008 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP9XQ93008 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP9XQ93008 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP9XQ93008 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP9XQ93008 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.64■□□□□ 0.57
USP9XQ93008 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP9XQ93008 CD177P1-201ENST00000606252 935 ntBASIC18.64■□□□□ 0.57
USP9XQ93008 AL353708.3-201ENST00000610272 989 ntBASIC18.64■□□□□ 0.57
USP9XQ93008 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP9XQ93008 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.64■□□□□ 0.57
USP9XQ93008 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.64■□□□□ 0.57
USP9XQ93008 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
USP9XQ93008 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP9XQ93008 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP9XQ93008 RPS2P55-201ENST00000397318 883 ntBASIC18.64■□□□□ 0.57
USP9XQ93008 POU5F1P4-201ENST00000413175 1085 ntBASIC18.64■□□□□ 0.57
USP9XQ93008 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP9XQ93008 AC107956.1-201ENST00000494359 873 ntBASIC18.64■□□□□ 0.57
USP9XQ93008 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.64■□□□□ 0.57
USP9XQ93008 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP9XQ93008 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.64■□□□□ 0.57
USP9XQ93008 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP9XQ93008 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.64■□□□□ 0.57
USP9XQ93008 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.63■□□□□ 0.57
USP9XQ93008 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP9XQ93008 TPM4P1-201ENST00000436100 807 ntBASIC18.63■□□□□ 0.57
USP9XQ93008 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.63■□□□□ 0.57
USP9XQ93008 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.63■□□□□ 0.57
USP9XQ93008 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.63■□□□□ 0.57
USP9XQ93008 HLA-B-256ENST00000639848 1089 ntBASIC18.63■□□□□ 0.57
USP9XQ93008 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP9XQ93008 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
USP9XQ93008 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP9XQ93008 AP004607.7-201ENST00000527152 1677 ntBASIC18.63■□□□□ 0.57
USP9XQ93008 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP9XQ93008 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP9XQ93008 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP9XQ93008 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP9XQ93008 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP9XQ93008 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP9XQ93008 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP9XQ93008 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP9XQ93008 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.62■□□□□ 0.57
USP9XQ93008 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.62■□□□□ 0.57
USP9XQ93008 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.62■□□□□ 0.57
USP9XQ93008 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP9XQ93008 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.62■□□□□ 0.57
USP9XQ93008 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.62■□□□□ 0.57
USP9XQ93008 KRT17P2-201ENST00000300992 1314 ntBASIC18.62■□□□□ 0.57
USP9XQ93008 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP9XQ93008 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP9XQ93008 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
USP9XQ93008 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.62■□□□□ 0.57
USP9XQ93008 POM121L13P-201ENST00000422362 380 ntBASIC18.62■□□□□ 0.57
USP9XQ93008 MIR4785-201ENST00000585005 73 ntBASIC18.62■□□□□ 0.57
USP9XQ93008 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP9XQ93008 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP9XQ93008 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP9XQ93008 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP9XQ93008 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP9XQ93008 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP9XQ93008 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP9XQ93008 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms