Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 ABHD17AP4-201ENST00000411545 909 ntBASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11BQ8TCY0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 DUX4L4-201ENST00000566884 1269 ntBASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11BQ8TCY0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.71□□□□□ -0.22
SMIM11BQ8TCY0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SMIM11BQ8TCY0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
SMIM11BQ8TCY0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11BQ8TCY0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SMIM11BQ8TCY0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11BQ8TCY0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 DUX4L9-201ENST00000449051 1259 ntBASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11BQ8TCY0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 AC120024.1-201ENST00000562672 995 ntBASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
SMIM11BQ8TCY0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms