Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHKBP1Q8TBC3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 SLC7A5P1-201ENST00000568957 537 ntBASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.23■■□□□ 1.15
SHKBP1Q8TBC3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 SLC29A4P1-201ENST00000398760 971 ntBASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 AF201337.1-201ENST00000520239 748 ntBASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SHKBP1Q8TBC3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 TERF1P5-201ENST00000477545 1207 ntBASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 CD99P1-205ENST00000527459 561 ntBASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 AC105036.2-201ENST00000569468 176 ntBASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 AC133552.2-202ENST00000575694 574 ntBASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 AC013268.1-206ENST00000638368 961 ntBASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 AC112229.1-201ENST00000639295 961 ntBASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHKBP1Q8TBC3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
SHKBP1Q8TBC3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHKBP1Q8TBC3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 AC139530.1-201ENST00000575312 1977 ntBASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 C1orf229-201ENST00000623686 2258 ntBASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms