Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 AC104187.1-201ENST00000607510 612 ntBASIC23.95■■□□□ 1.42
RETREG2Q8NC44 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 AC231657.2-201ENST00000624556 255 ntBASIC23.95■■□□□ 1.42
RETREG2Q8NC44 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 KRT87P-202ENST00000534226 1464 ntBASIC23.94■■□□□ 1.42
RETREG2Q8NC44 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 AC083906.2-201ENST00000511578 360 ntBASIC23.94■■□□□ 1.42
RETREG2Q8NC44 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 AC005224.4-201ENST00000583262 1652 ntBASIC23.94■■□□□ 1.42
RETREG2Q8NC44 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RETREG2Q8NC44 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RETREG2Q8NC44 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 AC007322.1-201ENST00000426983 750 ntBASIC23.92■■□□□ 1.42
RETREG2Q8NC44 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 OR7E47P-201ENST00000546390 1422 ntBASIC23.92■■□□□ 1.42
RETREG2Q8NC44 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RETREG2Q8NC44 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 AC142086.2-201ENST00000569753 217 ntBASIC23.91■■□□□ 1.42
RETREG2Q8NC44 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG2Q8NC44 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 AC007375.3-201ENST00000600936 2314 ntBASIC23.9■■□□□ 1.42
RETREG2Q8NC44 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RETREG2Q8NC44 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.89■■□□□ 1.42
RETREG2Q8NC44 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG2Q8NC44 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG2Q8NC44 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG2Q8NC44 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG2Q8NC44 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG2Q8NC44 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG2Q8NC44 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 TSPY6P-201ENST00000448518 926 ntBASIC23.89■■□□□ 1.41
RETREG2Q8NC44 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 AC005181.1-201ENST00000604782 1256 ntBASIC23.89■■□□□ 1.41
RETREG2Q8NC44 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RETREG2Q8NC44 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 DUX4L16-201ENST00000555130 1264 ntBASIC23.88■■□□□ 1.41
RETREG2Q8NC44 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms