Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 CROCCP5-201ENST00000436658 830 ntBASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 AC008175.2-201ENST00000612840 297 ntBASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 AC120498.10-201ENST00000621827 505 ntBASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 AC007322.1-201ENST00000426983 750 ntBASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 SLC7A5P2-201ENST00000553010 536 ntBASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 AC231657.2-201ENST00000624556 255 ntBASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.77■□□□□ 0.6
CNEP1R1Q8N9A8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNEP1R1Q8N9A8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.77■□□□□ 0.59
CNEP1R1Q8N9A8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.77■□□□□ 0.59
CNEP1R1Q8N9A8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNEP1R1Q8N9A8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNEP1R1Q8N9A8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 DUX4L16-201ENST00000555130 1264 ntBASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 AC003102.1-202ENST00000563394 1796 ntBASIC18.76■□□□□ 0.59
CNEP1R1Q8N9A8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNEP1R1Q8N9A8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 AC010536.3-201ENST00000620306 533 ntBASIC18.74■□□□□ 0.59
CNEP1R1Q8N9A8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms