Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
PCDH20Q8N6Y1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH20Q8N6Y1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH20Q8N6Y1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDH20Q8N6Y1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDH20Q8N6Y1 EEF1DP3-203ENST00000566025 782 ntBASIC21.58■■□□□ 1.05
PCDH20Q8N6Y1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH20Q8N6Y1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH20Q8N6Y1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH20Q8N6Y1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH20Q8N6Y1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDH20Q8N6Y1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 AC138907.5-202ENST00000569484 235 ntBASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 AC053503.5-201ENST00000601508 636 ntBASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH20Q8N6Y1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 KRT18P11-201ENST00000435214 1283 ntBASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 AP001160.3-201ENST00000601484 763 ntBASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH20Q8N6Y1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 AC004911.1-201ENST00000416316 871 ntBASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH20Q8N6Y1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 AC010141.2-201ENST00000452426 721 ntBASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH20Q8N6Y1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH20Q8N6Y1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms