Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 DUX4L6-201ENST00000626483 1275 ntBASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 DUX4L1-201ENST00000627662 1275 ntBASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 DUX4L8-201ENST00000629013 1275 ntBASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 DUX4L3-201ENST00000630187 1275 ntBASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 DUX4L7-201ENST00000630678 1275 ntBASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 DUX4L5-201ENST00000630834 1275 ntBASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 C11orf96-202ENST00000528572 1834 ntBASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf42Q8N5U0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 KRT18P14-201ENST00000534205 1250 ntBASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf42Q8N5U0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.53■□□□□ 0.4
C11orf42Q8N5U0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf42Q8N5U0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C11orf42Q8N5U0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C11orf42Q8N5U0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
C11orf42Q8N5U0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 AC003102.1-202ENST00000563394 1796 ntBASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
C11orf42Q8N5U0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf42Q8N5U0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf42Q8N5U0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf42Q8N5U0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms