Protein–RNA interactions for Protein: Q8N5I2

ARRDC1, Arrestin domain-containing protein 1, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1Q8N5I2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ARRDC1Q8N5I2 AC006128.1-201ENST00000624704 1661 ntBASIC17.73■□□□□ 0.43
ARRDC1Q8N5I2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARRDC1Q8N5I2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARRDC1Q8N5I2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ARRDC1Q8N5I2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARRDC1Q8N5I2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.73■□□□□ 0.43
ARRDC1Q8N5I2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ARRDC1Q8N5I2 KRT8P33-201ENST00000508125 1423 ntBASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 AC133637.1-201ENST00000624115 1537 ntBASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 MTDHP2-201ENST00000601468 714 ntBASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARRDC1Q8N5I2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.71■□□□□ 0.43
ARRDC1Q8N5I2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 AL451085.2-201ENST00000605085 799 ntBASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC1Q8N5I2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 AC007952.6-201ENST00000573168 2673 ntBASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 AC003957.1-201ENST00000625108 2673 ntBASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC1Q8N5I2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 Z92544.1-202ENST00000571933 1220 ntBASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC1Q8N5I2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms