Protein–RNA interactions for Protein: Q8N5H7

SH2D3C, SH2 domain-containing protein 3C, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3CQ8N5H7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
SH2D3CQ8N5H7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
SH2D3CQ8N5H7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 AC244015.2-201ENST00000616358 1861 ntBASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 AC097381.1-201ENST00000429019 1296 ntBASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.29■■□□□ 1.16
SH2D3CQ8N5H7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 AC012414.1-201ENST00000556676 535 ntBASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D3CQ8N5H7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 AL354811.1-201ENST00000610286 706 ntBASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SH2D3CQ8N5H7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SH2D3CQ8N5H7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SH2D3CQ8N5H7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 AC010141.3-201ENST00000456659 717 ntBASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 AC087239.1-201ENST00000622671 572 ntBASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH2D3CQ8N5H7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH2D3CQ8N5H7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 AC027612.3-201ENST00000413684 1047 ntBASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 AC087623.3-201ENST00000607047 1098 ntBASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 MIR5787-201ENST00000611784 55 ntBASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 MIR6084-201ENST00000622012 110 ntBASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 AC105233.4-201ENST00000642045 216 ntBASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms