Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 KRT18P20-201ENST00000548986 1279 ntBASIC22.53■■□□□ 1.2
TTC39CQ8N584 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
TTC39CQ8N584 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.53■■□□□ 1.2
TTC39CQ8N584 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39CQ8N584 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TTC39CQ8N584 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39CQ8N584 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.53■■□□□ 1.2
TTC39CQ8N584 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.52■■□□□ 1.2
TTC39CQ8N584 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39CQ8N584 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.52■■□□□ 1.2
TTC39CQ8N584 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TTC39CQ8N584 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TTC39CQ8N584 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.52■■□□□ 1.19
TTC39CQ8N584 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC39CQ8N584 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC39CQ8N584 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.51■■□□□ 1.19
TTC39CQ8N584 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 KRT18P5-201ENST00000436075 1291 ntBASIC22.51■■□□□ 1.19
TTC39CQ8N584 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 AC120498.10-201ENST00000621827 505 ntBASIC22.51■■□□□ 1.19
TTC39CQ8N584 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39CQ8N584 LINC00565-201ENST00000562710 2331 ntBASIC22.51■■□□□ 1.19
TTC39CQ8N584 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC39CQ8N584 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC39CQ8N584 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
TTC39CQ8N584 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC39CQ8N584 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.5■■□□□ 1.19
TTC39CQ8N584 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 AP001160.3-201ENST00000601484 763 ntBASIC22.5■■□□□ 1.19
TTC39CQ8N584 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.5■■□□□ 1.19
TTC39CQ8N584 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39CQ8N584 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC39CQ8N584 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TTC39CQ8N584 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 AL162430.1-201ENST00000480705 870 ntBASIC22.49■■□□□ 1.19
TTC39CQ8N584 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
TTC39CQ8N584 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39CQ8N584 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TTC39CQ8N584 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.48■■□□□ 1.19
TTC39CQ8N584 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39CQ8N584 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.48■■□□□ 1.19
TTC39CQ8N584 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39CQ8N584 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.48■■□□□ 1.19
TTC39CQ8N584 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.48■■□□□ 1.19
TTC39CQ8N584 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39CQ8N584 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39CQ8N584 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms