Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC26.27■■□□□ 1.8
SMC5Q8IY18 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC5Q8IY18 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC5Q8IY18 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMC5Q8IY18 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMC5Q8IY18 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.26■■□□□ 1.79
SMC5Q8IY18 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMC5Q8IY18 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMC5Q8IY18 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMC5Q8IY18 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.26■■□□□ 1.79
SMC5Q8IY18 AC012414.1-201ENST00000556676 535 ntBASIC26.26■■□□□ 1.79
SMC5Q8IY18 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SMC5Q8IY18 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC26.26■■□□□ 1.79
SMC5Q8IY18 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMC5Q8IY18 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMC5Q8IY18 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.25■■□□□ 1.79
SMC5Q8IY18 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SMC5Q8IY18 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.25■■□□□ 1.79
SMC5Q8IY18 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.25■■□□□ 1.79
SMC5Q8IY18 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC26.25■■□□□ 1.79
SMC5Q8IY18 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMC5Q8IY18 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMC5Q8IY18 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMC5Q8IY18 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMC5Q8IY18 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.24■■□□□ 1.79
SMC5Q8IY18 AL139246.5-201ENST00000606645 996 ntBASIC26.24■■□□□ 1.79
SMC5Q8IY18 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMC5Q8IY18 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMC5Q8IY18 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMC5Q8IY18 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.23■■□□□ 1.79
SMC5Q8IY18 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.23■■□□□ 1.79
SMC5Q8IY18 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.23■■□□□ 1.79
SMC5Q8IY18 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMC5Q8IY18 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
SMC5Q8IY18 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMC5Q8IY18 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.23■■□□□ 1.79
SMC5Q8IY18 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.23■■□□□ 1.79
SMC5Q8IY18 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.23■■□□□ 1.79
SMC5Q8IY18 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMC5Q8IY18 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC26.23■■□□□ 1.79
SMC5Q8IY18 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
SMC5Q8IY18 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMC5Q8IY18 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMC5Q8IY18 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
SMC5Q8IY18 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMC5Q8IY18 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.22■■□□□ 1.79
SMC5Q8IY18 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC26.22■■□□□ 1.79
SMC5Q8IY18 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
SMC5Q8IY18 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMC5Q8IY18 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
SMC5Q8IY18 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMC5Q8IY18 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMC5Q8IY18 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SMC5Q8IY18 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
SMC5Q8IY18 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.21■■□□□ 1.79
SMC5Q8IY18 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.21■■□□□ 1.79
SMC5Q8IY18 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.21■■□□□ 1.79
SMC5Q8IY18 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMC5Q8IY18 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMC5Q8IY18 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMC5Q8IY18 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.21■■□□□ 1.79
SMC5Q8IY18 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.21■■□□□ 1.79
SMC5Q8IY18 TPRG1LP1-201ENST00000598702 760 ntBASIC26.21■■□□□ 1.79
SMC5Q8IY18 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC26.21■■□□□ 1.79
SMC5Q8IY18 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SMC5Q8IY18 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SMC5Q8IY18 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC26.21■■□□□ 1.79
SMC5Q8IY18 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMC5Q8IY18 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMC5Q8IY18 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.2■■□□□ 1.79
SMC5Q8IY18 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMC5Q8IY18 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMC5Q8IY18 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMC5Q8IY18 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.2■■□□□ 1.78
SMC5Q8IY18 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
SMC5Q8IY18 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
SMC5Q8IY18 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC26.19■■□□□ 1.78
SMC5Q8IY18 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMC5Q8IY18 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC26.19■■□□□ 1.78
SMC5Q8IY18 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.19■■□□□ 1.78
SMC5Q8IY18 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.19■■□□□ 1.78
SMC5Q8IY18 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.19■■□□□ 1.78
SMC5Q8IY18 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC26.19■■□□□ 1.78
SMC5Q8IY18 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC26.19■■□□□ 1.78
SMC5Q8IY18 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMC5Q8IY18 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMC5Q8IY18 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMC5Q8IY18 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMC5Q8IY18 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMC5Q8IY18 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.18■■□□□ 1.78
SMC5Q8IY18 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMC5Q8IY18 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms