Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
APLFQ8IW19 AL354811.1-201ENST00000610286 706 ntBASIC20.81■□□□□ 0.92
APLFQ8IW19 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.81■□□□□ 0.92
APLFQ8IW19 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.81■□□□□ 0.92
APLFQ8IW19 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APLFQ8IW19 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APLFQ8IW19 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APLFQ8IW19 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APLFQ8IW19 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
APLFQ8IW19 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APLFQ8IW19 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
APLFQ8IW19 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.8■□□□□ 0.92
APLFQ8IW19 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APLFQ8IW19 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APLFQ8IW19 FAM99A-202ENST00000538190 1989 ntBASIC20.8■□□□□ 0.92
APLFQ8IW19 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.8■□□□□ 0.92
APLFQ8IW19 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
APLFQ8IW19 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.8■□□□□ 0.92
APLFQ8IW19 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APLFQ8IW19 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.8■□□□□ 0.92
APLFQ8IW19 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APLFQ8IW19 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.8■□□□□ 0.92
APLFQ8IW19 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APLFQ8IW19 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APLFQ8IW19 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APLFQ8IW19 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
APLFQ8IW19 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
APLFQ8IW19 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.79■□□□□ 0.92
APLFQ8IW19 AL157384.1-201ENST00000445995 2473 ntBASIC20.79■□□□□ 0.92
APLFQ8IW19 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
APLFQ8IW19 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APLFQ8IW19 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.79■□□□□ 0.92
APLFQ8IW19 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
APLFQ8IW19 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.79■□□□□ 0.92
APLFQ8IW19 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.79■□□□□ 0.92
APLFQ8IW19 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.79■□□□□ 0.92
APLFQ8IW19 AC012414.1-201ENST00000556676 535 ntBASIC20.79■□□□□ 0.92
APLFQ8IW19 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.79■□□□□ 0.92
APLFQ8IW19 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APLFQ8IW19 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.79■□□□□ 0.92
APLFQ8IW19 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
APLFQ8IW19 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.78■□□□□ 0.92
APLFQ8IW19 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.78■□□□□ 0.92
APLFQ8IW19 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.78■□□□□ 0.92
APLFQ8IW19 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APLFQ8IW19 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
APLFQ8IW19 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APLFQ8IW19 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.78■□□□□ 0.92
APLFQ8IW19 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APLFQ8IW19 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.78■□□□□ 0.92
APLFQ8IW19 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.78■□□□□ 0.92
APLFQ8IW19 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.78■□□□□ 0.92
APLFQ8IW19 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.78■□□□□ 0.92
APLFQ8IW19 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APLFQ8IW19 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APLFQ8IW19 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APLFQ8IW19 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
APLFQ8IW19 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.77■□□□□ 0.92
APLFQ8IW19 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
APLFQ8IW19 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APLFQ8IW19 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APLFQ8IW19 AL499627.2-201ENST00000606283 725 ntBASIC20.77■□□□□ 0.92
APLFQ8IW19 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
APLFQ8IW19 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
APLFQ8IW19 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APLFQ8IW19 AC133637.1-201ENST00000624115 1537 ntBASIC20.77■□□□□ 0.92
APLFQ8IW19 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APLFQ8IW19 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APLFQ8IW19 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.77■□□□□ 0.91
APLFQ8IW19 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 AC092437.1-201ENST00000624794 1048 ntBASIC20.76■□□□□ 0.91
APLFQ8IW19 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.76■□□□□ 0.91
APLFQ8IW19 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.76■□□□□ 0.91
APLFQ8IW19 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
APLFQ8IW19 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.76■□□□□ 0.91
APLFQ8IW19 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APLFQ8IW19 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
APLFQ8IW19 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
APLFQ8IW19 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
APLFQ8IW19 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
APLFQ8IW19 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.75■□□□□ 0.91
APLFQ8IW19 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
APLFQ8IW19 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms