Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.39■■□□□ 1.18
RNF135Q8IUD6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF135Q8IUD6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RNF135Q8IUD6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.39■■□□□ 1.17
RNF135Q8IUD6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RNF135Q8IUD6 CYP2T1P-201ENST00000432607 1285 ntBASIC22.39■■□□□ 1.17
RNF135Q8IUD6 AC128676.1-201ENST00000454392 318 ntBASIC22.39■■□□□ 1.17
RNF135Q8IUD6 AC013268.1-206ENST00000638368 961 ntBASIC22.39■■□□□ 1.17
RNF135Q8IUD6 AC112229.1-201ENST00000639295 961 ntBASIC22.39■■□□□ 1.17
RNF135Q8IUD6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 UNC93B4-201ENST00000505679 747 ntBASIC22.38■■□□□ 1.17
RNF135Q8IUD6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 AC083880.1-201ENST00000608266 535 ntBASIC22.38■■□□□ 1.17
RNF135Q8IUD6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 AC068338.2-201ENST00000563278 1430 ntBASIC22.38■■□□□ 1.17
RNF135Q8IUD6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.38■■□□□ 1.17
RNF135Q8IUD6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.37■■□□□ 1.17
RNF135Q8IUD6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 KRT18P20-201ENST00000548986 1279 ntBASIC22.36■■□□□ 1.17
RNF135Q8IUD6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF135Q8IUD6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.35■■□□□ 1.17
RNF135Q8IUD6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 OR10C1-204ENST00000622521 1039 ntBASIC22.35■■□□□ 1.17
RNF135Q8IUD6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF135Q8IUD6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 MIR1224-201ENST00000408193 85 ntBASIC22.34■■□□□ 1.17
RNF135Q8IUD6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 TERF1P5-201ENST00000477545 1207 ntBASIC22.34■■□□□ 1.17
RNF135Q8IUD6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RNF135Q8IUD6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF135Q8IUD6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF135Q8IUD6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF135Q8IUD6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF135Q8IUD6 AC093787.1-201ENST00000450396 207 ntBASIC22.33■■□□□ 1.17
RNF135Q8IUD6 AC010141.2-201ENST00000452426 721 ntBASIC22.33■■□□□ 1.17
RNF135Q8IUD6 AC097658.1-201ENST00000475555 843 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms