Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
VRK2Q86Y07 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.54■□□□□ 0.72
VRK2Q86Y07 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.54■□□□□ 0.72
VRK2Q86Y07 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.54■□□□□ 0.72
VRK2Q86Y07 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.54■□□□□ 0.72
VRK2Q86Y07 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.54■□□□□ 0.72
VRK2Q86Y07 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 RASA4CP-201ENST00000424092 1398 ntBASIC19.54■□□□□ 0.72
VRK2Q86Y07 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VRK2Q86Y07 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VRK2Q86Y07 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK2Q86Y07 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.53■□□□□ 0.72
VRK2Q86Y07 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VRK2Q86Y07 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.53■□□□□ 0.72
VRK2Q86Y07 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.53■□□□□ 0.72
VRK2Q86Y07 AL136967.2-201ENST00000623968 743 ntBASIC19.53■□□□□ 0.72
VRK2Q86Y07 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VRK2Q86Y07 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VRK2Q86Y07 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 AC009237.3-201ENST00000393279 1427 ntBASIC19.52■□□□□ 0.72
VRK2Q86Y07 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
VRK2Q86Y07 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
VRK2Q86Y07 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK2Q86Y07 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VRK2Q86Y07 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VRK2Q86Y07 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
VRK2Q86Y07 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VRK2Q86Y07 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
VRK2Q86Y07 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK2Q86Y07 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK2Q86Y07 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.51■□□□□ 0.71
VRK2Q86Y07 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK2Q86Y07 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.51■□□□□ 0.71
VRK2Q86Y07 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VRK2Q86Y07 AC091305.1-201ENST00000479476 895 ntBASIC19.51■□□□□ 0.71
VRK2Q86Y07 AC055733.4-201ENST00000638462 1354 ntBASIC19.51■□□□□ 0.71
VRK2Q86Y07 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.51■□□□□ 0.71
VRK2Q86Y07 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
VRK2Q86Y07 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.51■□□□□ 0.71
VRK2Q86Y07 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK2Q86Y07 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK2Q86Y07 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.5■□□□□ 0.71
VRK2Q86Y07 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.5■□□□□ 0.71
VRK2Q86Y07 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.5■□□□□ 0.71
VRK2Q86Y07 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
VRK2Q86Y07 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 MIR572-201ENST00000384983 95 ntBASIC19.5■□□□□ 0.71
VRK2Q86Y07 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.5■□□□□ 0.71
VRK2Q86Y07 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.5■□□□□ 0.71
VRK2Q86Y07 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VRK2Q86Y07 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK2Q86Y07 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK2Q86Y07 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VRK2Q86Y07 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK2Q86Y07 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.49■□□□□ 0.71
VRK2Q86Y07 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.49■□□□□ 0.71
VRK2Q86Y07 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.49■□□□□ 0.71
VRK2Q86Y07 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
VRK2Q86Y07 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK2Q86Y07 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VRK2Q86Y07 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.49■□□□□ 0.71
VRK2Q86Y07 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms