Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS13CQ709C8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS13CQ709C8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS13CQ709C8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.78■□□□□ 0.44
VPS13CQ709C8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VPS13CQ709C8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.78■□□□□ 0.44
VPS13CQ709C8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS13CQ709C8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS13CQ709C8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VPS13CQ709C8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS13CQ709C8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS13CQ709C8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS13CQ709C8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS13CQ709C8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS13CQ709C8 AC137767.1-201ENST00000602918 1920 ntBASIC17.77■□□□□ 0.44
VPS13CQ709C8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.77■□□□□ 0.44
VPS13CQ709C8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS13CQ709C8 UBE2SP1-201ENST00000450587 669 ntBASIC17.77■□□□□ 0.44
VPS13CQ709C8 AC097658.1-201ENST00000475555 843 ntBASIC17.77■□□□□ 0.44
VPS13CQ709C8 AL162412.1-201ENST00000567129 965 ntBASIC17.77■□□□□ 0.44
VPS13CQ709C8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.77■□□□□ 0.44
VPS13CQ709C8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS13CQ709C8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
VPS13CQ709C8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS13CQ709C8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VPS13CQ709C8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
VPS13CQ709C8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VPS13CQ709C8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS13CQ709C8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.77■□□□□ 0.43
VPS13CQ709C8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.77■□□□□ 0.43
VPS13CQ709C8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.77■□□□□ 0.43
VPS13CQ709C8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
VPS13CQ709C8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.77■□□□□ 0.43
VPS13CQ709C8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.77■□□□□ 0.43
VPS13CQ709C8 AL445228.2-201ENST00000605589 952 ntBASIC17.77■□□□□ 0.43
VPS13CQ709C8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 AC012306.2-201ENST00000609350 630 ntBASIC17.76■□□□□ 0.43
VPS13CQ709C8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 KRT17P1-201ENST00000399211 1546 ntBASIC17.76■□□□□ 0.43
VPS13CQ709C8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 AC233263.1-201ENST00000578059 224 ntBASIC17.76■□□□□ 0.43
VPS13CQ709C8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13CQ709C8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS13CQ709C8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
VPS13CQ709C8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.75■□□□□ 0.43
VPS13CQ709C8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 C1QBPP2-201ENST00000528754 825 ntBASIC17.75■□□□□ 0.43
VPS13CQ709C8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS13CQ709C8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
VPS13CQ709C8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS13CQ709C8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VPS13CQ709C8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS13CQ709C8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.75■□□□□ 0.43
VPS13CQ709C8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13CQ709C8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS13CQ709C8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS13CQ709C8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS13CQ709C8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 AC093323.1-202ENST00000635031 2045 ntBASIC17.74■□□□□ 0.43
VPS13CQ709C8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS13CQ709C8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS13CQ709C8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VPS13CQ709C8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS13CQ709C8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS13CQ709C8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms