Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.92■■□□□ 1.42
SHC4Q6S5L8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHC4Q6S5L8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.92■■□□□ 1.42
SHC4Q6S5L8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHC4Q6S5L8 AC009237.3-201ENST00000393279 1427 ntBASIC23.92■■□□□ 1.42
SHC4Q6S5L8 RASA4CP-201ENST00000424092 1398 ntBASIC23.91■■□□□ 1.42
SHC4Q6S5L8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.91■■□□□ 1.42
SHC4Q6S5L8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SHC4Q6S5L8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SHC4Q6S5L8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.9■■□□□ 1.42
SHC4Q6S5L8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHC4Q6S5L8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.89■■□□□ 1.42
SHC4Q6S5L8 AC005224.4-201ENST00000583262 1652 ntBASIC23.89■■□□□ 1.42
SHC4Q6S5L8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHC4Q6S5L8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHC4Q6S5L8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SHC4Q6S5L8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHC4Q6S5L8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.89■■□□□ 1.42
SHC4Q6S5L8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHC4Q6S5L8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHC4Q6S5L8 MIR572-201ENST00000384983 95 ntBASIC23.89■■□□□ 1.41
SHC4Q6S5L8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.89■■□□□ 1.41
SHC4Q6S5L8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.89■■□□□ 1.41
SHC4Q6S5L8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHC4Q6S5L8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHC4Q6S5L8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.89■■□□□ 1.41
SHC4Q6S5L8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHC4Q6S5L8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 SUDS3P1-201ENST00000505831 966 ntBASIC23.88■■□□□ 1.41
SHC4Q6S5L8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SHC4Q6S5L8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 AC091305.1-201ENST00000479476 895 ntBASIC23.87■■□□□ 1.41
SHC4Q6S5L8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 BX005040.4-201ENST00000637145 1518 ntBASIC23.87■■□□□ 1.41
SHC4Q6S5L8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHC4Q6S5L8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.86■■□□□ 1.41
SHC4Q6S5L8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHC4Q6S5L8 AL157384.1-201ENST00000445995 2473 ntBASIC23.86■■□□□ 1.41
SHC4Q6S5L8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.85■■□□□ 1.41
SHC4Q6S5L8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms