Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 AC080038.3-201ENST00000623346 1952 ntBASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 MIR663A-201ENST00000385250 93 ntBASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 CNN2P6-201ENST00000439038 900 ntBASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 SLC7A5P2-201ENST00000553010 536 ntBASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.56■□□□□ 0.72
H3F3CQ6NXT2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 POU5F1P4-201ENST00000413175 1085 ntBASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 AC104771.1-201ENST00000603335 964 ntBASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 AC008175.2-201ENST00000612840 297 ntBASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 AC003102.1-202ENST00000563394 1796 ntBASIC19.55■□□□□ 0.72
H3F3CQ6NXT2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 AL050303.2-201ENST00000619798 666 ntBASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 C9orf163-202ENST00000624034 2573 ntBASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
H3F3CQ6NXT2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 AL109923.1-201ENST00000618799 583 ntBASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3CQ6NXT2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 GPX1P1-201ENST00000388829 606 ntBASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 TERF1P5-201ENST00000477545 1207 ntBASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 AC005181.1-201ENST00000604782 1256 ntBASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3F3CQ6NXT2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.52■□□□□ 0.71
H3F3CQ6NXT2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
H3F3CQ6NXT2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
H3F3CQ6NXT2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 AL121832.2-201ENST00000610979 668 ntBASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 AC120498.10-201ENST00000621827 505 ntBASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 AC013268.1-206ENST00000638368 961 ntBASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 AC112229.1-201ENST00000639295 961 ntBASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms