Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VARS2Q5ST30 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VARS2Q5ST30 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VARS2Q5ST30 AC061975.6-201ENST00000579045 1553 ntBASIC22.47■■□□□ 1.19
VARS2Q5ST30 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 SLC29A4P1-201ENST00000398760 971 ntBASIC22.47■■□□□ 1.19
VARS2Q5ST30 CYP2T1P-201ENST00000432607 1285 ntBASIC22.47■■□□□ 1.19
VARS2Q5ST30 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 AL138781.1-201ENST00000566567 1274 ntBASIC22.47■■□□□ 1.19
VARS2Q5ST30 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VARS2Q5ST30 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VARS2Q5ST30 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.47■■□□□ 1.19
VARS2Q5ST30 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VARS2Q5ST30 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VARS2Q5ST30 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VARS2Q5ST30 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VARS2Q5ST30 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VARS2Q5ST30 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VARS2Q5ST30 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.46■■□□□ 1.19
VARS2Q5ST30 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.46■■□□□ 1.19
VARS2Q5ST30 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.46■■□□□ 1.19
VARS2Q5ST30 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.46■■□□□ 1.19
VARS2Q5ST30 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VARS2Q5ST30 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
VARS2Q5ST30 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VARS2Q5ST30 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VARS2Q5ST30 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.46■■□□□ 1.19
VARS2Q5ST30 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VARS2Q5ST30 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.45■■□□□ 1.19
VARS2Q5ST30 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VARS2Q5ST30 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.45■■□□□ 1.18
VARS2Q5ST30 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.45■■□□□ 1.18
VARS2Q5ST30 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.45■■□□□ 1.18
VARS2Q5ST30 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VARS2Q5ST30 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.45■■□□□ 1.18
VARS2Q5ST30 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VARS2Q5ST30 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.45■■□□□ 1.18
VARS2Q5ST30 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.45■■□□□ 1.18
VARS2Q5ST30 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VARS2Q5ST30 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
VARS2Q5ST30 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
VARS2Q5ST30 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
VARS2Q5ST30 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VARS2Q5ST30 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.44■■□□□ 1.18
VARS2Q5ST30 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VARS2Q5ST30 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.44■■□□□ 1.18
VARS2Q5ST30 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VARS2Q5ST30 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 RBM17P2-201ENST00000616397 1405 ntBASIC22.43■■□□□ 1.18
VARS2Q5ST30 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 CD99P1-205ENST00000527459 561 ntBASIC22.43■■□□□ 1.18
VARS2Q5ST30 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
VARS2Q5ST30 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VARS2Q5ST30 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
VARS2Q5ST30 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VARS2Q5ST30 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
VARS2Q5ST30 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.42■■□□□ 1.18
VARS2Q5ST30 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
VARS2Q5ST30 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VARS2Q5ST30 AC010542.4-201ENST00000563151 1910 ntBASIC22.42■■□□□ 1.18
VARS2Q5ST30 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VARS2Q5ST30 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
VARS2Q5ST30 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.42■■□□□ 1.18
VARS2Q5ST30 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.42■■□□□ 1.18
VARS2Q5ST30 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.42■■□□□ 1.18
VARS2Q5ST30 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.42■■□□□ 1.18
VARS2Q5ST30 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VARS2Q5ST30 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VARS2Q5ST30 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
VARS2Q5ST30 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
VARS2Q5ST30 FAM99A-202ENST00000538190 1989 ntBASIC22.41■■□□□ 1.18
VARS2Q5ST30 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VARS2Q5ST30 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
VARS2Q5ST30 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VARS2Q5ST30 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms