Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 YIL024CYIL024C 570 nt3.01□□□□□ -1.93
DDC1Q08949 YLR285C-AYLR285C-A 171 nt3.01□□□□□ -1.93
DDC1Q08949 SMA2YML066C 1110 nt3.01□□□□□ -1.93
DDC1Q08949 ERV41YML067C 1059 nt3.01□□□□□ -1.93
DDC1Q08949 RPL6AYML073C 531 nt3.01□□□□□ -1.93
DDC1Q08949 RLP7YNL002C 969 nt3.01□□□□□ -1.93
DDC1Q08949 YPL035CYPL035C 348 nt3.01□□□□□ -1.93
DDC1Q08949 ICS2YBR157C 768 nt3.01□□□□□ -1.93
DDC1Q08949 TSC11YER093C 4293 nt3.01□□□□□ -1.93
DDC1Q08949 MDM1YML104C 3384 nt3□□□□□ -1.93
DDC1Q08949 MIP6YHR015W 1980 nt3□□□□□ -1.93
DDC1Q08949 GIC2YDR309C 1152 nt3□□□□□ -1.93
DDC1Q08949 PIB1YDR313C 861 nt3□□□□□ -1.93
DDC1Q08949 CGR1YGL029W 363 nt3□□□□□ -1.93
DDC1Q08949 DOG1YHR044C 741 nt3□□□□□ -1.93
DDC1Q08949 DAL2YIR029W 1032 nt3□□□□□ -1.93
DDC1Q08949 EMC2YJR088C 879 nt3□□□□□ -1.93
DDC1Q08949 GSP1YLR293C 660 nt3□□□□□ -1.93
DDC1Q08949 RDN58-1RDN58-1 158 nt3□□□□□ -1.93
DDC1Q08949 RDN58-2RDN58-2 158 nt3□□□□□ -1.93
DDC1Q08949 OCA2YNL056W 594 nt3□□□□□ -1.93
DDC1Q08949 PEX11YOL147C 711 nt3□□□□□ -1.93
DDC1Q08949 PNO1YOR145C 825 nt3□□□□□ -1.93
DDC1Q08949 RPS12YOR369C 432 nt3□□□□□ -1.93
DDC1Q08949 PHO88YBR106W 567 nt3□□□□□ -1.93
DDC1Q08949 HUL5YGL141W 2733 nt3□□□□□ -1.93
DDC1Q08949 ILS1YBL076C 3219 nt2.99□□□□□ -1.93
DDC1Q08949 YNR066CYNR066C 1311 nt2.99□□□□□ -1.93
DDC1Q08949 RMT2YDR465C 1239 nt2.99□□□□□ -1.93
DDC1Q08949 VMA8YEL051W 771 nt2.99□□□□□ -1.93
DDC1Q08949 YGL138CYGL138C 1038 nt2.99□□□□□ -1.93
DDC1Q08949 RPS25AYGR027C 327 nt2.99□□□□□ -1.93
DDC1Q08949 PCD1YLR151C 1023 nt2.99□□□□□ -1.93
DDC1Q08949 PML39YML107C 1005 nt2.99□□□□□ -1.93
DDC1Q08949 ATG34YOL083W 1239 nt2.99□□□□□ -1.93
DDC1Q08949 FIG1YBR040W 897 nt2.99□□□□□ -1.93
DDC1Q08949 YPR050CYPR050C 414 nt2.99□□□□□ -1.93
DDC1Q08949 EBS1YDR206W 2655 nt2.99□□□□□ -1.93
DDC1Q08949 FAR1YJL157C 2493 nt2.99□□□□□ -1.93
DDC1Q08949 SST2YLR452C 2097 nt2.99□□□□□ -1.93
DDC1Q08949 VAC8YEL013W 1737 nt2.99□□□□□ -1.93
DDC1Q08949 RCY1YJL204C 2523 nt2.98□□□□□ -1.93
DDC1Q08949 MDM10YAL010C 1482 nt2.98□□□□□ -1.93
DDC1Q08949 PFS1YHR185C 714 nt2.98□□□□□ -1.93
DDC1Q08949 SNX4YJL036W 1272 nt2.98□□□□□ -1.93
DDC1Q08949 SDH3YKL141W 597 nt2.98□□□□□ -1.93
DDC1Q08949 DCP1YOL149W 696 nt2.98□□□□□ -1.93
DDC1Q08949 YOL162WYOL162W 648 nt2.98□□□□□ -1.93
DDC1Q08949 YOR331CYOR331C 558 nt2.98□□□□□ -1.93
DDC1Q08949 YBR300CYBR300C 498 nt2.98□□□□□ -1.93
DDC1Q08949 PEX34YCL056C 435 nt2.98□□□□□ -1.93
DDC1Q08949 DBP10YDL031W 2988 nt2.98□□□□□ -1.93
DDC1Q08949 COM2YER130C 1332 nt2.97□□□□□ -1.93
DDC1Q08949 PMR1YGL167C 2853 nt2.97□□□□□ -1.93
DDC1Q08949 SHR3YDL212W 633 nt2.97□□□□□ -1.93
DDC1Q08949 PLP1YDR183W 693 nt2.97□□□□□ -1.93
DDC1Q08949 DYN2YDR424C 279 nt2.97□□□□□ -1.93
DDC1Q08949 LRS4YDR439W 1044 nt2.97□□□□□ -1.93
DDC1Q08949 AST2YER101C 1293 nt2.97□□□□□ -1.93
DDC1Q08949 YFR032C-BYFR032C-B 264 nt2.97□□□□□ -1.93
DDC1Q08949 YGR064WYGR064W 369 nt2.97□□□□□ -1.93
DDC1Q08949 PTI1YGR156W 1278 nt2.97□□□□□ -1.93
DDC1Q08949 PRE8YML092C 753 nt2.97□□□□□ -1.93
DDC1Q08949 RAS1YOR101W 930 nt2.97□□□□□ -1.93
DDC1Q08949 DIM1YPL266W 957 nt2.97□□□□□ -1.93
DDC1Q08949 YBR292CYBR292C 372 nt2.97□□□□□ -1.93
DDC1Q08949 SMC2YFR031C 3513 nt2.97□□□□□ -1.93
DDC1Q08949 ECM21YBL101C 3354 nt2.97□□□□□ -1.93
DDC1Q08949 CCT7YJL111W 1653 nt2.97□□□□□ -1.93
DDC1Q08949 GCD6YDR211W 2139 nt2.96□□□□□ -1.93
DDC1Q08949 YDR034C-CYDR034C-C 1317 nt2.96□□□□□ -1.93
DDC1Q08949 YLR410W-AYLR410W-A 1317 nt2.96□□□□□ -1.93
DDC1Q08949 SPT15YER148W 723 nt2.96□□□□□ -1.94
DDC1Q08949 SFH1YLR321C 1281 nt2.96□□□□□ -1.94
DDC1Q08949 MSN1YOL116W 1149 nt2.96□□□□□ -1.94
DDC1Q08949 PRM4YPL156C 855 nt2.96□□□□□ -1.94
DDC1Q08949 PIN4YBL051C 2007 nt2.96□□□□□ -1.94
DDC1Q08949 YIL169CYIL169C 2988 nt2.96□□□□□ -1.94
DDC1Q08949 MSM1YGR171C 1728 nt2.96□□□□□ -1.94
DDC1Q08949 SIN3YOL004W 4611 nt2.96□□□□□ -1.94
DDC1Q08949 YML096WYML096W 1578 nt2.95□□□□□ -1.94
DDC1Q08949 CSR2YPR030W 3366 nt2.95□□□□□ -1.94
DDC1Q08949 SNU23YDL098C 585 nt2.95□□□□□ -1.94
DDC1Q08949 CLB3YDL155W 1284 nt2.95□□□□□ -1.94
DDC1Q08949 MPC3YGR243W 441 nt2.95□□□□□ -1.94
DDC1Q08949 YIL161WYIL161W 708 nt2.95□□□□□ -1.94
DDC1Q08949 YLR297WYLR297W 390 nt2.95□□□□□ -1.94
DDC1Q08949 YBL062WYBL062W 381 nt2.95□□□□□ -1.94
DDC1Q08949 PKP2YGL059W 1476 nt2.95□□□□□ -1.94
DDC1Q08949 ORC1YML065W 2745 nt2.94□□□□□ -1.94
DDC1Q08949 ARG2YJL071W 1725 nt2.94□□□□□ -1.94
DDC1Q08949 YIL082W-AYIL082W-A 4497 nt2.94□□□□□ -1.94
DDC1Q08949 RRP42YDL111C 798 nt2.94□□□□□ -1.94
DDC1Q08949 SPT2YER161C 1002 nt2.94□□□□□ -1.94
DDC1Q08949 ERP6YGL002W 651 nt2.94□□□□□ -1.94
DDC1Q08949 YGR114CYGR114C 390 nt2.94□□□□□ -1.94
DDC1Q08949 SWD2YKL018W 990 nt2.94□□□□□ -1.94
DDC1Q08949 YML094C-AYML094C-A 402 nt2.94□□□□□ -1.94
DDC1Q08949 YNL013CYNL013C 378 nt2.94□□□□□ -1.94
DDC1Q08949 PBP2YBR233W 1242 nt2.94□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 33.5 ms