Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CACNA1DQ01668 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.72■□□□□ 0.59
CACNA1DQ01668 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.72■□□□□ 0.59
CACNA1DQ01668 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA1DQ01668 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CACNA1DQ01668 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA1DQ01668 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA1DQ01668 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA1DQ01668 MIR718-201ENST00000390190 70 ntBASIC18.71■□□□□ 0.59
CACNA1DQ01668 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.71■□□□□ 0.59
CACNA1DQ01668 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.71■□□□□ 0.59
CACNA1DQ01668 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA1DQ01668 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CACNA1DQ01668 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CACNA1DQ01668 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.71■□□□□ 0.59
CACNA1DQ01668 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.71■□□□□ 0.59
CACNA1DQ01668 AC016405.3-201ENST00000607710 860 ntBASIC18.71■□□□□ 0.59
CACNA1DQ01668 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA1DQ01668 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CACNA1DQ01668 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA1DQ01668 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA1DQ01668 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA1DQ01668 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA1DQ01668 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA1DQ01668 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA1DQ01668 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA1DQ01668 BX276092.2-201ENST00000417668 665 ntBASIC18.7■□□□□ 0.58
CACNA1DQ01668 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.7■□□□□ 0.58
CACNA1DQ01668 AP003097.1-201ENST00000530657 1135 ntBASIC18.7■□□□□ 0.58
CACNA1DQ01668 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CACNA1DQ01668 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CACNA1DQ01668 AC010536.3-201ENST00000620306 533 ntBASIC18.7■□□□□ 0.58
CACNA1DQ01668 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CACNA1DQ01668 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.7■□□□□ 0.58
CACNA1DQ01668 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA1DQ01668 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.69■□□□□ 0.58
CACNA1DQ01668 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CACNA1DQ01668 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.69■□□□□ 0.58
CACNA1DQ01668 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1DQ01668 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CACNA1DQ01668 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1DQ01668 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1DQ01668 AC005224.4-201ENST00000583262 1652 ntBASIC18.69■□□□□ 0.58
CACNA1DQ01668 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1DQ01668 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1DQ01668 MIPEPP3-201ENST00000412105 444 ntBASIC18.69■□□□□ 0.58
CACNA1DQ01668 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.69■□□□□ 0.58
CACNA1DQ01668 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1DQ01668 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1DQ01668 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1DQ01668 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1DQ01668 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1DQ01668 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1DQ01668 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1DQ01668 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1DQ01668 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1DQ01668 AC097658.1-201ENST00000475555 843 ntBASIC18.68■□□□□ 0.58
CACNA1DQ01668 AC091874.3-201ENST00000512672 1195 ntBASIC18.68■□□□□ 0.58
CACNA1DQ01668 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 DUSP8P3-201ENST00000399571 1760 ntBASIC18.68■□□□□ 0.58
CACNA1DQ01668 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1DQ01668 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1DQ01668 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNA1DQ01668 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1DQ01668 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1DQ01668 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA1DQ01668 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1DQ01668 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.67■□□□□ 0.58
CACNA1DQ01668 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CACNA1DQ01668 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1DQ01668 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1DQ01668 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.67■□□□□ 0.58
CACNA1DQ01668 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CACNA1DQ01668 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA1DQ01668 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA1DQ01668 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CACNA1DQ01668 CYP2T1P-201ENST00000432607 1285 ntBASIC18.66■□□□□ 0.58
CACNA1DQ01668 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA1DQ01668 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CACNA1DQ01668 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CACNA1DQ01668 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CACNA1DQ01668 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1DQ01668 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1DQ01668 LINC01960-201ENST00000563759 1884 ntBASIC18.66■□□□□ 0.58
CACNA1DQ01668 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1DQ01668 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1DQ01668 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1DQ01668 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1DQ01668 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms