Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 snR42snR42 351 nt3.39□□□□□ -1.87
RPA49Q01080 BYE1YKL005C 1785 nt3.38□□□□□ -1.87
RPA49Q01080 GCN1YGL195W 8019 nt3.38□□□□□ -1.87
RPA49Q01080 NTO1YPR031W 2247 nt3.38□□□□□ -1.87
RPA49Q01080 CHO2YGR157W 2610 nt3.38□□□□□ -1.87
RPA49Q01080 RPL30YGL030W 318 nt3.38□□□□□ -1.87
RPA49Q01080 YGR039WYGR039W 312 nt3.38□□□□□ -1.87
RPA49Q01080 YHR180WYHR180W 492 nt3.38□□□□□ -1.87
RPA49Q01080 NNF1YJR112W 606 nt3.38□□□□□ -1.87
RPA49Q01080 NNT1YLR285W 786 nt3.38□□□□□ -1.87
RPA49Q01080 YLR400WYLR400W 474 nt3.38□□□□□ -1.87
RPA49Q01080 SPC2YML055W 537 nt3.38□□□□□ -1.87
RPA49Q01080 MRPL17YNL252C 846 nt3.38□□□□□ -1.87
RPA49Q01080 DGA1YOR245C 1257 nt3.38□□□□□ -1.87
RPA49Q01080 SFG1YOR315W 1041 nt3.38□□□□□ -1.87
RPA49Q01080 CUP9YPL177C 921 nt3.38□□□□□ -1.87
RPA49Q01080 SKN7YHR206W 1869 nt3.38□□□□□ -1.87
RPA49Q01080 IRC3YDR332W 2070 nt3.38□□□□□ -1.87
RPA49Q01080 HEF3YNL014W 3135 nt3.37□□□□□ -1.87
RPA49Q01080 PUG1YER185W 912 nt3.37□□□□□ -1.87
RPA49Q01080 MRM2YGL136C 963 nt3.37□□□□□ -1.87
RPA49Q01080 YJL175WYJL175W 513 nt3.37□□□□□ -1.87
RPA49Q01080 SRT1YMR101C 1032 nt3.37□□□□□ -1.87
RPA49Q01080 RPB8YOR224C 441 nt3.37□□□□□ -1.87
RPA49Q01080 SAD1YFR005C 1347 nt3.37□□□□□ -1.87
RPA49Q01080 SPT14YPL175W 1359 nt3.37□□□□□ -1.87
RPA49Q01080 ARP4YJL081C 1470 nt3.36□□□□□ -1.87
RPA49Q01080 snR68snR68 136 nt3.36□□□□□ -1.87
RPA49Q01080 RUB1YDR139C 234 nt3.36□□□□□ -1.87
RPA49Q01080 VMA7YGR020C 357 nt3.36□□□□□ -1.87
RPA49Q01080 YOR366WYOR366W 354 nt3.36□□□□□ -1.87
RPA49Q01080 FDH2YPL275W 711 nt3.36□□□□□ -1.87
RPA49Q01080 YOR296WYOR296W 3870 nt3.36□□□□□ -1.87
RPA49Q01080 ENP2YGR145W 2124 nt3.35□□□□□ -1.87
RPA49Q01080 ATG21YPL100W 1491 nt3.35□□□□□ -1.87
RPA49Q01080 POL3YDL102W 3294 nt3.35□□□□□ -1.87
RPA49Q01080 ARF1YDL192W 546 nt3.35□□□□□ -1.87
RPA49Q01080 AI3Q0060 1248 nt3.35□□□□□ -1.87
RPA49Q01080 MIG2YGL209W 1149 nt3.35□□□□□ -1.87
RPA49Q01080 OST5YGL226C-A 261 nt3.35□□□□□ -1.87
RPA49Q01080 PPT2YPL148C 522 nt3.35□□□□□ -1.87
RPA49Q01080 STE6YKL209C 3873 nt3.35□□□□□ -1.87
RPA49Q01080 BEM4YPL161C 1902 nt3.34□□□□□ -1.87
RPA49Q01080 UBP5YER144C 2418 nt3.34□□□□□ -1.87
RPA49Q01080 MGT1YDL200C 567 nt3.34□□□□□ -1.87
RPA49Q01080 GUK1YDR454C 564 nt3.34□□□□□ -1.87
RPA49Q01080 LIF1YGL090W 1266 nt3.34□□□□□ -1.87
RPA49Q01080 RPL1BYGL135W 654 nt3.34□□□□□ -1.87
RPA49Q01080 THP2YHR167W 786 nt3.34□□□□□ -1.87
RPA49Q01080 YJL047C-AYJL047C-A 135 nt3.34□□□□□ -1.87
RPA49Q01080 IME1YJR094C 1083 nt3.34□□□□□ -1.87
RPA49Q01080 UBC12YLR306W 567 nt3.34□□□□□ -1.87
RPA49Q01080 AAR2YBL074C 1068 nt3.34□□□□□ -1.87
RPA49Q01080 YNL184CYNL184C 327 nt3.34□□□□□ -1.87
RPA49Q01080 RPL1AYPL220W 654 nt3.34□□□□□ -1.87
RPA49Q01080 YPR053CYPR053C 456 nt3.34□□□□□ -1.87
RPA49Q01080 CMD1YBR109C 444 nt3.34□□□□□ -1.87
RPA49Q01080 YBR116CYBR116C 528 nt3.34□□□□□ -1.87
RPA49Q01080 YBR201C-AYBR201C-A 204 nt3.34□□□□□ -1.87
RPA49Q01080 PCI8YIL071C 1335 nt3.34□□□□□ -1.87
RPA49Q01080 TGL3YMR313C 1929 nt3.33□□□□□ -1.88
RPA49Q01080 APC5YOR249C 2058 nt3.33□□□□□ -1.88
RPA49Q01080 YJR037WYJR037W 384 nt3.33□□□□□ -1.88
RPA49Q01080 YLR307C-AYLR307C-A 264 nt3.33□□□□□ -1.88
RPA49Q01080 YPL135C-AYPL135C-A 174 nt3.33□□□□□ -1.88
RPA49Q01080 DIM1YPL266W 957 nt3.33□□□□□ -1.88
RPA49Q01080 DPB3YBR278W 606 nt3.33□□□□□ -1.88
RPA49Q01080 CDC40YDR364C 1368 nt3.33□□□□□ -1.88
RPA49Q01080 SIZ1YDR409W 2715 nt3.33□□□□□ -1.88
RPA49Q01080 XRN1YGL173C 4587 nt3.32□□□□□ -1.88
RPA49Q01080 SAG1YJR004C 1953 nt3.32□□□□□ -1.88
RPA49Q01080 RED1YLR263W 2484 nt3.32□□□□□ -1.88
RPA49Q01080 CBS2YDR197W 1170 nt3.32□□□□□ -1.88
RPA49Q01080 MIG3YER028C 1185 nt3.32□□□□□ -1.88
RPA49Q01080 AIM11YER093C-A 414 nt3.32□□□□□ -1.88
RPA49Q01080 COG7YGL005C 840 nt3.32□□□□□ -1.88
RPA49Q01080 SPT4YGR063C 309 nt3.32□□□□□ -1.88
RPA49Q01080 RSM27YGR215W 333 nt3.32□□□□□ -1.88
RPA49Q01080 YHL026CYHL026C 948 nt3.32□□□□□ -1.88
RPA49Q01080 COX6YHR051W 447 nt3.32□□□□□ -1.88
RPA49Q01080 SUI2YJR007W 915 nt3.32□□□□□ -1.88
RPA49Q01080 MRPL16YBL038W 699 nt3.32□□□□□ -1.88
RPA49Q01080 ERG2YMR202W 669 nt3.32□□□□□ -1.88
RPA49Q01080 YBL055CYBL055C 1257 nt3.32□□□□□ -1.88
RPA49Q01080 IPP1YBR011C 864 nt3.32□□□□□ -1.88
RPA49Q01080 BTS1YPL069C 1008 nt3.32□□□□□ -1.88
RPA49Q01080 MDM1YML104C 3384 nt3.31□□□□□ -1.88
RPA49Q01080 PAM1YDR251W 2493 nt3.31□□□□□ -1.88
RPA49Q01080 TVP15YDR100W 432 nt3.31□□□□□ -1.88
RPA49Q01080 BRR6YGL247W 594 nt3.31□□□□□ -1.88
RPA49Q01080 tQ(UUG)BtQ(UUG)B 72 nt3.31□□□□□ -1.88
RPA49Q01080 RPA12YJR063W 378 nt3.31□□□□□ -1.88
RPA49Q01080 SOD1YJR104C 465 nt3.31□□□□□ -1.88
RPA49Q01080 MRP8YKL142W 660 nt3.31□□□□□ -1.88
RPA49Q01080 RPN13YLR421C 471 nt3.31□□□□□ -1.88
RPA49Q01080 MCA1YOR197W 1299 nt3.31□□□□□ -1.88
RPA49Q01080 YOR238WYOR238W 912 nt3.31□□□□□ -1.88
RPA49Q01080 YPR027CYPR027C 834 nt3.31□□□□□ -1.88
RPA49Q01080 KAP95YLR347C 2586 nt3.31□□□□□ -1.88
RPA49Q01080 MPS1YDL028C 2295 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 23 ms