Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ACTA1P68133 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTA1P68133 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTA1P68133 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACTA1P68133 KRT16P3-201ENST00000439127 1283 ntBASIC18.81■□□□□ 0.6
ACTA1P68133 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.81■□□□□ 0.6
ACTA1P68133 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.81■□□□□ 0.6
ACTA1P68133 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTA1P68133 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTA1P68133 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.81■□□□□ 0.6
ACTA1P68133 LINC01006-201ENST00000333319 2292 ntBASIC18.81■□□□□ 0.6
ACTA1P68133 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTA1P68133 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ACTA1P68133 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ACTA1P68133 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACTA1P68133 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.81■□□□□ 0.6
ACTA1P68133 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ACTA1P68133 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTA1P68133 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTA1P68133 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTA1P68133 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.8■□□□□ 0.6
ACTA1P68133 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.8■□□□□ 0.6
ACTA1P68133 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.8■□□□□ 0.6
ACTA1P68133 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTA1P68133 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.8■□□□□ 0.6
ACTA1P68133 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTA1P68133 AL356740.2-201ENST00000601559 647 ntBASIC18.8■□□□□ 0.6
ACTA1P68133 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.8■□□□□ 0.6
ACTA1P68133 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACTA1P68133 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTA1P68133 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTA1P68133 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTA1P68133 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ACTA1P68133 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTA1P68133 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTA1P68133 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTA1P68133 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTA1P68133 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTA1P68133 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTA1P68133 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ACTA1P68133 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ACTA1P68133 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.79■□□□□ 0.6
ACTA1P68133 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTA1P68133 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTA1P68133 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ACTA1P68133 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTA1P68133 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTA1P68133 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
ACTA1P68133 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTA1P68133 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ACTA1P68133 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 SRD5A1P1-201ENST00000442297 786 ntBASIC18.78■□□□□ 0.6
ACTA1P68133 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTA1P68133 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTA1P68133 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ACTA1P68133 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTA1P68133 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ACTA1P68133 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTA1P68133 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTA1P68133 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTA1P68133 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ACTA1P68133 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTA1P68133 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTA1P68133 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTA1P68133 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ACTA1P68133 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTA1P68133 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACTA1P68133 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACTA1P68133 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTA1P68133 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTA1P68133 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTA1P68133 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ACTA1P68133 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTA1P68133 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ACTA1P68133 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.76■□□□□ 0.59
ACTA1P68133 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.76■□□□□ 0.59
ACTA1P68133 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ACTA1P68133 AC010525.1-201ENST00000585559 441 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms