Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.64■□□□□ 0.89
YBX1P67809 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YBX1P67809 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.64■□□□□ 0.89
YBX1P67809 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YBX1P67809 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YBX1P67809 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
YBX1P67809 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YBX1P67809 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 AC055733.4-201ENST00000638462 1354 ntBASIC20.63■□□□□ 0.89
YBX1P67809 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.63■□□□□ 0.89
YBX1P67809 DUX4L2-201ENST00000561772 1275 ntBASIC20.63■□□□□ 0.89
YBX1P67809 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.63■□□□□ 0.89
YBX1P67809 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
YBX1P67809 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
YBX1P67809 DUX4L6-201ENST00000626483 1275 ntBASIC20.63■□□□□ 0.89
YBX1P67809 DUX4L1-201ENST00000627662 1275 ntBASIC20.63■□□□□ 0.89
YBX1P67809 DUX4L8-201ENST00000629013 1275 ntBASIC20.63■□□□□ 0.89
YBX1P67809 DUX4L3-201ENST00000630187 1275 ntBASIC20.63■□□□□ 0.89
YBX1P67809 DUX4L7-201ENST00000630678 1275 ntBASIC20.63■□□□□ 0.89
YBX1P67809 DUX4L5-201ENST00000630834 1275 ntBASIC20.63■□□□□ 0.89
YBX1P67809 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
YBX1P67809 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.63■□□□□ 0.89
YBX1P67809 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 AP006587.3-201ENST00000525742 1516 ntBASIC20.63■□□□□ 0.89
YBX1P67809 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
YBX1P67809 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
YBX1P67809 AC244015.2-201ENST00000616358 1861 ntBASIC20.62■□□□□ 0.89
YBX1P67809 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YBX1P67809 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YBX1P67809 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
YBX1P67809 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YBX1P67809 AC123595.1-201ENST00000440769 1046 ntBASIC20.62■□□□□ 0.89
YBX1P67809 TERF1P2-201ENST00000583350 1212 ntBASIC20.62■□□□□ 0.89
YBX1P67809 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
YBX1P67809 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
YBX1P67809 LINC02228-203ENST00000641970 1355 ntBASIC20.61■□□□□ 0.89
YBX1P67809 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
YBX1P67809 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
YBX1P67809 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
YBX1P67809 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.61■□□□□ 0.89
YBX1P67809 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
YBX1P67809 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
YBX1P67809 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.61■□□□□ 0.89
YBX1P67809 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.61■□□□□ 0.89
YBX1P67809 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
YBX1P67809 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
YBX1P67809 AC009237.3-201ENST00000393279 1427 ntBASIC20.61■□□□□ 0.89
YBX1P67809 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.61■□□□□ 0.89
YBX1P67809 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.61■□□□□ 0.89
YBX1P67809 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
YBX1P67809 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
YBX1P67809 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YBX1P67809 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.6■□□□□ 0.89
YBX1P67809 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.6■□□□□ 0.89
YBX1P67809 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.6■□□□□ 0.89
YBX1P67809 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
YBX1P67809 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
YBX1P67809 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.6■□□□□ 0.89
YBX1P67809 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YBX1P67809 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
YBX1P67809 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
YBX1P67809 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YBX1P67809 AC003102.1-202ENST00000563394 1796 ntBASIC20.59■□□□□ 0.89
YBX1P67809 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YBX1P67809 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
YBX1P67809 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
YBX1P67809 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
YBX1P67809 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YBX1P67809 KRT18P14-201ENST00000534205 1250 ntBASIC20.59■□□□□ 0.89
YBX1P67809 KRT18P61-201ENST00000585825 1298 ntBASIC20.59■□□□□ 0.89
YBX1P67809 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms