Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.32■□□□□ 0.84
RPL38P63173 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL38P63173 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL38P63173 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.32■□□□□ 0.84
RPL38P63173 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPL38P63173 AC024257.2-201ENST00000549699 147 ntBASIC20.32■□□□□ 0.84
RPL38P63173 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.32■□□□□ 0.84
RPL38P63173 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RPL38P63173 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL38P63173 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RPL38P63173 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL38P63173 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL38P63173 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.32■□□□□ 0.84
RPL38P63173 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL38P63173 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.31■□□□□ 0.84
RPL38P63173 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 AL136162.1-201ENST00000607711 1078 ntBASIC20.31■□□□□ 0.84
RPL38P63173 AC131212.1-201ENST00000613771 668 ntBASIC20.31■□□□□ 0.84
RPL38P63173 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.31■□□□□ 0.84
RPL38P63173 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL38P63173 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RPL38P63173 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPL38P63173 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPL38P63173 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RPL38P63173 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPL38P63173 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPL38P63173 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.3■□□□□ 0.84
RPL38P63173 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPL38P63173 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.3■□□□□ 0.84
RPL38P63173 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
RPL38P63173 AC126544.1-201ENST00000580842 1059 ntBASIC20.3■□□□□ 0.84
RPL38P63173 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPL38P63173 AC233992.3-201ENST00000607491 485 ntBASIC20.3■□□□□ 0.84
RPL38P63173 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
RPL38P63173 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPL38P63173 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPL38P63173 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RPL38P63173 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.29■□□□□ 0.84
RPL38P63173 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.29■□□□□ 0.84
RPL38P63173 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
RPL38P63173 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RPL38P63173 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RPL38P63173 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RPL38P63173 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.29■□□□□ 0.84
RPL38P63173 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RPL38P63173 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 AC133561.4-201ENST00000566112 224 ntBASIC20.29■□□□□ 0.84
RPL38P63173 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.29■□□□□ 0.84
RPL38P63173 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.29■□□□□ 0.84
RPL38P63173 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.29■□□□□ 0.84
RPL38P63173 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.29■□□□□ 0.84
RPL38P63173 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.29■□□□□ 0.84
RPL38P63173 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPL38P63173 AL049796.1-201ENST00000565336 1766 ntBASIC20.29■□□□□ 0.84
RPL38P63173 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.28■□□□□ 0.84
RPL38P63173 AC135279.3-201ENST00000610945 1311 ntBASIC20.28■□□□□ 0.84
RPL38P63173 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL38P63173 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.28■□□□□ 0.84
RPL38P63173 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.28■□□□□ 0.84
RPL38P63173 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL38P63173 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RPL38P63173 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL38P63173 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPL38P63173 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.28■□□□□ 0.84
RPL38P63173 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.28■□□□□ 0.84
RPL38P63173 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RPL38P63173 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.28■□□□□ 0.84
RPL38P63173 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL38P63173 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.28■□□□□ 0.84
RPL38P63173 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL38P63173 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPL38P63173 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL38P63173 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.28■□□□□ 0.84
RPL38P63173 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL38P63173 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL38P63173 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL38P63173 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL38P63173 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL38P63173 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL38P63173 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL38P63173 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms