Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LSM6P62312 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LSM6P62312 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LSM6P62312 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LSM6P62312 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM6P62312 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.58■□□□□ 0.57
LSM6P62312 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.58■□□□□ 0.57
LSM6P62312 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.58■□□□□ 0.57
LSM6P62312 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LSM6P62312 IRS3P-201ENST00000223076 1006 ntBASIC18.58■□□□□ 0.56
LSM6P62312 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LSM6P62312 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM6P62312 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM6P62312 AL137060.1-201ENST00000618151 2648 ntBASIC18.58■□□□□ 0.56
LSM6P62312 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM6P62312 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
LSM6P62312 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.58■□□□□ 0.56
LSM6P62312 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM6P62312 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM6P62312 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM6P62312 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
LSM6P62312 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSM6P62312 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.57■□□□□ 0.56
LSM6P62312 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.57■□□□□ 0.56
LSM6P62312 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM6P62312 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LSM6P62312 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LSM6P62312 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM6P62312 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM6P62312 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.57■□□□□ 0.56
LSM6P62312 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.57■□□□□ 0.56
LSM6P62312 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LSM6P62312 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.57■□□□□ 0.56
LSM6P62312 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSM6P62312 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSM6P62312 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSM6P62312 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LSM6P62312 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.56■□□□□ 0.56
LSM6P62312 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.56■□□□□ 0.56
LSM6P62312 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.56■□□□□ 0.56
LSM6P62312 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.56■□□□□ 0.56
LSM6P62312 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.56■□□□□ 0.56
LSM6P62312 AC105265.2-201ENST00000467189 838 ntBASIC18.56■□□□□ 0.56
LSM6P62312 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 TPRG1LP1-201ENST00000598702 760 ntBASIC18.56■□□□□ 0.56
LSM6P62312 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.56■□□□□ 0.56
LSM6P62312 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.56■□□□□ 0.56
LSM6P62312 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.56■□□□□ 0.56
LSM6P62312 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSM6P62312 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.56■□□□□ 0.56
LSM6P62312 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM6P62312 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.56■□□□□ 0.56
LSM6P62312 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM6P62312 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM6P62312 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM6P62312 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM6P62312 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM6P62312 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM6P62312 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LSM6P62312 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.55■□□□□ 0.56
LSM6P62312 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM6P62312 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.55■□□□□ 0.56
LSM6P62312 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM6P62312 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.55■□□□□ 0.56
LSM6P62312 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM6P62312 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM6P62312 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM6P62312 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM6P62312 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM6P62312 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.54■□□□□ 0.56
LSM6P62312 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.54■□□□□ 0.56
LSM6P62312 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM6P62312 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.53■□□□□ 0.56
LSM6P62312 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM6P62312 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM6P62312 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM6P62312 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LSM6P62312 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms