Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH13P55290 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDH13P55290 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH13P55290 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH13P55290 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH13P55290 AC233992.3-201ENST00000607491 485 ntBASIC20.65■□□□□ 0.9
CDH13P55290 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
CDH13P55290 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH13P55290 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.64■□□□□ 0.9
CDH13P55290 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.64■□□□□ 0.9
CDH13P55290 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
CDH13P55290 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
CDH13P55290 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CDH13P55290 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH13P55290 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDH13P55290 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH13P55290 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH13P55290 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDH13P55290 AC126544.1-201ENST00000580842 1059 ntBASIC20.64■□□□□ 0.89
CDH13P55290 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH13P55290 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDH13P55290 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH13P55290 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH13P55290 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH13P55290 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH13P55290 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH13P55290 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH13P55290 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH13P55290 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDH13P55290 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDH13P55290 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH13P55290 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH13P55290 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDH13P55290 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH13P55290 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH13P55290 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH13P55290 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH13P55290 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH13P55290 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.63■□□□□ 0.89
CDH13P55290 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH13P55290 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.63■□□□□ 0.89
CDH13P55290 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH13P55290 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH13P55290 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH13P55290 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH13P55290 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.63■□□□□ 0.89
CDH13P55290 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDH13P55290 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH13P55290 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDH13P55290 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH13P55290 AL049796.1-201ENST00000565336 1766 ntBASIC20.62■□□□□ 0.89
CDH13P55290 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 AC135279.3-201ENST00000610945 1311 ntBASIC20.62■□□□□ 0.89
CDH13P55290 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.62■□□□□ 0.89
CDH13P55290 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDH13P55290 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH13P55290 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDH13P55290 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH13P55290 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH13P55290 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
CDH13P55290 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CDH13P55290 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDH13P55290 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH13P55290 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.61■□□□□ 0.89
CDH13P55290 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.61■□□□□ 0.89
CDH13P55290 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH13P55290 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH13P55290 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDH13P55290 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH13P55290 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH13P55290 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH13P55290 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDH13P55290 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH13P55290 AC008764.7-201ENST00000593779 1081 ntBASIC20.6■□□□□ 0.89
CDH13P55290 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH13P55290 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH13P55290 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH13P55290 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms