Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH11P55287 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDH11P55287 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH11P55287 AC233992.3-201ENST00000607491 485 ntBASIC19.3■□□□□ 0.68
CDH11P55287 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.3■□□□□ 0.68
CDH11P55287 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CDH11P55287 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH11P55287 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CDH11P55287 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH11P55287 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH11P55287 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH11P55287 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CDH11P55287 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH11P55287 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH11P55287 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH11P55287 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH11P55287 BX842568.3-201ENST00000418104 571 ntBASIC19.29■□□□□ 0.68
CDH11P55287 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.29■□□□□ 0.68
CDH11P55287 AC079089.2-201ENST00000531211 1277 ntBASIC19.29■□□□□ 0.68
CDH11P55287 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH11P55287 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH11P55287 AC104564.3-201ENST00000582367 638 ntBASIC19.29■□□□□ 0.68
CDH11P55287 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH11P55287 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH11P55287 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDH11P55287 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH11P55287 AC026471.6-201ENST00000622954 1905 ntBASIC19.29■□□□□ 0.68
CDH11P55287 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH11P55287 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH11P55287 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH11P55287 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH11P55287 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH11P55287 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.28■□□□□ 0.68
CDH11P55287 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CDH11P55287 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.28■□□□□ 0.68
CDH11P55287 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CDH11P55287 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH11P55287 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH11P55287 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH11P55287 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH11P55287 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH11P55287 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDH11P55287 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH11P55287 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
CDH11P55287 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH11P55287 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH11P55287 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH11P55287 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH11P55287 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH11P55287 AL031602.1-201ENST00000633169 911 ntBASIC19.27■□□□□ 0.68
CDH11P55287 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH11P55287 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CDH11P55287 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH11P55287 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH11P55287 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.67
CDH11P55287 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.27■□□□□ 0.67
CDH11P55287 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH11P55287 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH11P55287 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH11P55287 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH11P55287 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH11P55287 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH11P55287 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH11P55287 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDH11P55287 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH11P55287 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH11P55287 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH11P55287 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDH11P55287 AL157384.1-201ENST00000445995 2473 ntBASIC19.25■□□□□ 0.67
CDH11P55287 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH11P55287 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH11P55287 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH11P55287 AC126544.1-201ENST00000580842 1059 ntBASIC19.25■□□□□ 0.67
CDH11P55287 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH11P55287 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH11P55287 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH11P55287 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH11P55287 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH11P55287 OR7E47P-201ENST00000546390 1422 ntBASIC19.25■□□□□ 0.67
CDH11P55287 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDH11P55287 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH11P55287 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH11P55287 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 IRS3P-201ENST00000223076 1006 ntBASIC19.24■□□□□ 0.67
CDH11P55287 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH11P55287 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 AC026271.2-201ENST00000428091 497 ntBASIC19.24■□□□□ 0.67
CDH11P55287 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH11P55287 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH11P55287 MIR5787-201ENST00000611784 55 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms