Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VCPP55072 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VCPP55072 SLC7A5P2-201ENST00000553010 536 ntBASIC22.62■■□□□ 1.21
VCPP55072 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.62■■□□□ 1.21
VCPP55072 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.62■■□□□ 1.21
VCPP55072 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.62■■□□□ 1.21
VCPP55072 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
VCPP55072 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.62■■□□□ 1.21
VCPP55072 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VCPP55072 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.62■■□□□ 1.21
VCPP55072 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.61■■□□□ 1.21
VCPP55072 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.61■■□□□ 1.21
VCPP55072 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
VCPP55072 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
VCPP55072 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VCPP55072 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VCPP55072 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VCPP55072 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VCPP55072 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VCPP55072 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VCPP55072 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.61■■□□□ 1.21
VCPP55072 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.61■■□□□ 1.21
VCPP55072 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.61■■□□□ 1.21
VCPP55072 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.61■■□□□ 1.21
VCPP55072 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VCPP55072 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VCPP55072 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.6■■□□□ 1.21
VCPP55072 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.6■■□□□ 1.21
VCPP55072 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VCPP55072 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.6■■□□□ 1.21
VCPP55072 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.6■■□□□ 1.21
VCPP55072 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VCPP55072 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VCPP55072 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
VCPP55072 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.6■■□□□ 1.21
VCPP55072 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VCPP55072 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
VCPP55072 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
VCPP55072 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.59■■□□□ 1.21
VCPP55072 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.59■■□□□ 1.21
VCPP55072 MFSD11-216ENST00000590393 1141 ntBASIC22.59■■□□□ 1.21
VCPP55072 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VCPP55072 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
VCPP55072 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
VCPP55072 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.58■■□□□ 1.21
VCPP55072 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
VCPP55072 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
VCPP55072 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.58■■□□□ 1.21
VCPP55072 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
VCPP55072 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.58■■□□□ 1.21
VCPP55072 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.58■■□□□ 1.21
VCPP55072 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.58■■□□□ 1.21
VCPP55072 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
VCPP55072 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
VCPP55072 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
VCPP55072 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.58■■□□□ 1.2
VCPP55072 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
VCPP55072 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.57■■□□□ 1.2
VCPP55072 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.57■■□□□ 1.2
VCPP55072 AC007375.3-201ENST00000600936 2314 ntBASIC22.57■■□□□ 1.2
VCPP55072 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VCPP55072 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VCPP55072 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.57■■□□□ 1.2
VCPP55072 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.57■■□□□ 1.2
VCPP55072 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.57■■□□□ 1.2
VCPP55072 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
VCPP55072 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VCPP55072 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VCPP55072 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VCPP55072 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.57■■□□□ 1.2
VCPP55072 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VCPP55072 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.56■■□□□ 1.2
VCPP55072 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.56■■□□□ 1.2
VCPP55072 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VCPP55072 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VCPP55072 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
VCPP55072 AC010141.3-201ENST00000456659 717 ntBASIC22.56■■□□□ 1.2
VCPP55072 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.56■■□□□ 1.2
VCPP55072 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.56■■□□□ 1.2
VCPP55072 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VCPP55072 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VCPP55072 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VCPP55072 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.56■■□□□ 1.2
VCPP55072 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VCPP55072 FBXW4P1-201ENST00000426721 2239 ntBASIC22.55■■□□□ 1.2
VCPP55072 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VCPP55072 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
VCPP55072 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VCPP55072 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.55■■□□□ 1.2
VCPP55072 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VCPP55072 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.55■■□□□ 1.2
VCPP55072 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms