Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.51■□□□□ 0.07
APOC4P55056 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APOC4P55056 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOC4P55056 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
APOC4P55056 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOC4P55056 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.51■□□□□ 0.07
APOC4P55056 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.51■□□□□ 0.07
APOC4P55056 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.51■□□□□ 0.07
APOC4P55056 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOC4P55056 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
APOC4P55056 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOC4P55056 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.5■□□□□ 0.07
APOC4P55056 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOC4P55056 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC15.5■□□□□ 0.07
APOC4P55056 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOC4P55056 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOC4P55056 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.5■□□□□ 0.07
APOC4P55056 ID1-201ENST00000376105 1233 ntBASIC15.5■□□□□ 0.07
APOC4P55056 AC007322.1-201ENST00000426983 750 ntBASIC15.5■□□□□ 0.07
APOC4P55056 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.5■□□□□ 0.07
APOC4P55056 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.5■□□□□ 0.07
APOC4P55056 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.5■□□□□ 0.07
APOC4P55056 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
APOC4P55056 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.5■□□□□ 0.07
APOC4P55056 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.5■□□□□ 0.07
APOC4P55056 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.5■□□□□ 0.07
APOC4P55056 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.5■□□□□ 0.07
APOC4P55056 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.5■□□□□ 0.07
APOC4P55056 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.5■□□□□ 0.07
APOC4P55056 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOC4P55056 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.5■□□□□ 0.07
APOC4P55056 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.5■□□□□ 0.07
APOC4P55056 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.49■□□□□ 0.07
APOC4P55056 PKM-204ENST00000449901 2526 ntTSL 2 BASIC15.49■□□□□ 0.07
APOC4P55056 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.49■□□□□ 0.07
APOC4P55056 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.49■□□□□ 0.07
APOC4P55056 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.49■□□□□ 0.07
APOC4P55056 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.49■□□□□ 0.07
APOC4P55056 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOC4P55056 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
APOC4P55056 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.48■□□□□ 0.07
APOC4P55056 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
APOC4P55056 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
APOC4P55056 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.48■□□□□ 0.07
APOC4P55056 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.48■□□□□ 0.07
APOC4P55056 AC010536.3-201ENST00000620306 533 ntBASIC15.48■□□□□ 0.07
APOC4P55056 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 LTK-203ENST00000453182 2412 ntTSL 2 BASIC15.48■□□□□ 0.07
APOC4P55056 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
APOC4P55056 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOC4P55056 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 AC080038.3-201ENST00000623346 1952 ntBASIC15.47■□□□□ 0.07
APOC4P55056 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.47■□□□□ 0.07
APOC4P55056 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
APOC4P55056 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.47■□□□□ 0.07
APOC4P55056 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 AIRN-201ENST00000601203 4374 ntBASIC15.47■□□□□ 0.07
APOC4P55056 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.47■□□□□ 0.07
APOC4P55056 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.47■□□□□ 0.07
APOC4P55056 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 MIR663A-201ENST00000385250 93 ntBASIC15.47■□□□□ 0.07
APOC4P55056 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 KRT16P2-201ENST00000414673 1423 ntBASIC15.47■□□□□ 0.07
APOC4P55056 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.47■□□□□ 0.07
APOC4P55056 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
APOC4P55056 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.47■□□□□ 0.07
APOC4P55056 AC013268.1-206ENST00000638368 961 ntBASIC15.47■□□□□ 0.07
APOC4P55056 AC112229.1-201ENST00000639295 961 ntBASIC15.47■□□□□ 0.07
APOC4P55056 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.47■□□□□ 0.07
APOC4P55056 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APOC4P55056 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.47■□□□□ 0.07
APOC4P55056 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.47■□□□□ 0.07
APOC4P55056 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.47■□□□□ 0.07
APOC4P55056 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
APOC4P55056 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
APOC4P55056 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APOC4P55056 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.46■□□□□ 0.07
APOC4P55056 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms