Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 VPS17YOR132W 1656 nt3.38□□□□□ -1.87
RPT4P53549 XRN1YGL173C 4587 nt3.38□□□□□ -1.87
RPT4P53549 WHI3YNL197C 1986 nt3.38□□□□□ -1.87
RPT4P53549 MTR4YJL050W 3222 nt3.38□□□□□ -1.87
RPT4P53549 DSE1YER124C 1722 nt3.37□□□□□ -1.87
RPT4P53549 MNT4YNR059W 1743 nt3.37□□□□□ -1.87
RPT4P53549 UBC9YDL064W 474 nt3.37□□□□□ -1.87
RPT4P53549 SCM4YGR049W 564 nt3.37□□□□□ -1.87
RPT4P53549 AIM25YJR100C 984 nt3.37□□□□□ -1.87
RPT4P53549 MRP8YKL142W 660 nt3.37□□□□□ -1.87
RPT4P53549 ERV41YML067C 1059 nt3.37□□□□□ -1.87
RPT4P53549 YBL062WYBL062W 381 nt3.37□□□□□ -1.87
RPT4P53549 ATG3YNR007C 933 nt3.37□□□□□ -1.87
RPT4P53549 RAS1YOR101W 930 nt3.37□□□□□ -1.87
RPT4P53549 RRP36YOR287C 903 nt3.37□□□□□ -1.87
RPT4P53549 BYE1YKL005C 1785 nt3.37□□□□□ -1.87
RPT4P53549 PIN4YBL051C 2007 nt3.37□□□□□ -1.87
RPT4P53549 YDR034C-CYDR034C-C 1317 nt3.37□□□□□ -1.87
RPT4P53549 YLR410W-AYLR410W-A 1317 nt3.37□□□□□ -1.87
RPT4P53549 PWP2YCR057C 2772 nt3.37□□□□□ -1.87
RPT4P53549 KAP95YLR347C 2586 nt3.37□□□□□ -1.87
RPT4P53549 SPO14YKR031C 5052 nt3.37□□□□□ -1.87
RPT4P53549 YIL169CYIL169C 2988 nt3.36□□□□□ -1.87
RPT4P53549 RNT1YMR239C 1416 nt3.36□□□□□ -1.87
RPT4P53549 NSP1YJL041W 2472 nt3.36□□□□□ -1.87
RPT4P53549 CCM1YGR150C 2595 nt3.36□□□□□ -1.87
RPT4P53549 JJJ1YNL227C 1773 nt3.36□□□□□ -1.87
RPT4P53549 AST2YER101C 1293 nt3.36□□□□□ -1.87
RPT4P53549 CUP1-1YHR053C 186 nt3.36□□□□□ -1.87
RPT4P53549 CUP1-2YHR055C 186 nt3.36□□□□□ -1.87
RPT4P53549 YHR097CYHR097C 1101 nt3.36□□□□□ -1.87
RPT4P53549 GLG2YJL137C 1143 nt3.36□□□□□ -1.87
RPT4P53549 YAL034C-BYAL034C-B 354 nt3.36□□□□□ -1.87
RPT4P53549 SWD2YKL018W 990 nt3.36□□□□□ -1.87
RPT4P53549 PCD1YLR151C 1023 nt3.36□□□□□ -1.87
RPT4P53549 YLR339CYLR339C 552 nt3.36□□□□□ -1.87
RPT4P53549 YML037CYML037C 1023 nt3.36□□□□□ -1.87
RPT4P53549 RPL6AYML073C 531 nt3.36□□□□□ -1.87
RPT4P53549 YMR099CYMR099C 894 nt3.36□□□□□ -1.87
RPT4P53549 PET20YPL159C 762 nt3.36□□□□□ -1.87
RPT4P53549 BI3Q0115 1554 nt3.36□□□□□ -1.87
RPT4P53549 HBT1YDL223C 3141 nt3.36□□□□□ -1.87
RPT4P53549 ATG21YPL100W 1491 nt3.35□□□□□ -1.87
RPT4P53549 CHS2YBR038W 2892 nt3.35□□□□□ -1.87
RPT4P53549 snR70snR70 164 nt3.35□□□□□ -1.87
RPT4P53549 CLB3YDL155W 1284 nt3.35□□□□□ -1.87
RPT4P53549 PIB1YDR313C 861 nt3.35□□□□□ -1.87
RPT4P53549 YDR464C-AYDR464C-A 189 nt3.35□□□□□ -1.87
RPT4P53549 FSH1YHR049W 732 nt3.35□□□□□ -1.87
RPT4P53549 COQ9YLR201C 783 nt3.35□□□□□ -1.87
RPT4P53549 TMA10YLR327C 261 nt3.35□□□□□ -1.87
RPT4P53549 ECM13YBL043W 774 nt3.35□□□□□ -1.87
RPT4P53549 YBL108WYBL108W 306 nt3.35□□□□□ -1.87
RPT4P53549 YPR077CYPR077C 372 nt3.35□□□□□ -1.87
RPT4P53549 ARG2YJL071W 1725 nt3.35□□□□□ -1.87
RPT4P53549 ETP1YHL010C 1758 nt3.34□□□□□ -1.87
RPT4P53549 STE14YDR410C 720 nt3.34□□□□□ -1.87
RPT4P53549 YDR431WYDR431W 312 nt3.34□□□□□ -1.87
RPT4P53549 PRE1YER012W 597 nt3.34□□□□□ -1.87
RPT4P53549 PEX14YGL153W 1026 nt3.34□□□□□ -1.87
RPT4P53549 YGL204CYGL204C 306 nt3.34□□□□□ -1.87
RPT4P53549 YGR111WYGR111W 1203 nt3.34□□□□□ -1.87
RPT4P53549 YIL175WYIL175W 318 nt3.34□□□□□ -1.87
RPT4P53549 YJL222W-BYJL222W-B 138 nt3.34□□□□□ -1.87
RPT4P53549 GRX7YBR014C 612 nt3.34□□□□□ -1.87
RPT4P53549 MAK11YKL021C 1407 nt3.34□□□□□ -1.88
RPT4P53549 PRP22YER013W 3438 nt3.34□□□□□ -1.88
RPT4P53549 ART10YLR392C 1557 nt3.34□□□□□ -1.88
RPT4P53549 APC11YDL008W 498 nt3.33□□□□□ -1.88
RPT4P53549 ECM11YDR446W 909 nt3.33□□□□□ -1.88
RPT4P53549 SPT2YER161C 1002 nt3.33□□□□□ -1.88
RPT4P53549 MMF1YIL051C 438 nt3.33□□□□□ -1.88
RPT4P53549 YIR021W-AYIR021W-A 213 nt3.33□□□□□ -1.88
RPT4P53549 DAL2YIR029W 1032 nt3.33□□□□□ -1.88
RPT4P53549 CDC5YMR001C 2118 nt3.33□□□□□ -1.88
RPT4P53549 TRI1YMR233W 681 nt3.33□□□□□ -1.88
RPT4P53549 snR11snR11 258 nt3.33□□□□□ -1.88
RPT4P53549 DGA1YOR245C 1257 nt3.33□□□□□ -1.88
RPT4P53549 APA1YCL050C 966 nt3.33□□□□□ -1.88
RPT4P53549 RAX2YLR084C 3663 nt3.33□□□□□ -1.88
RPT4P53549 SIZ1YDR409W 2715 nt3.33□□□□□ -1.88
RPT4P53549 SKN7YHR206W 1869 nt3.33□□□□□ -1.88
RPT4P53549 SLS1YLR139C 1932 nt3.32□□□□□ -1.88
RPT4P53549 CHS3YBR023C 3498 nt3.32□□□□□ -1.88
RPT4P53549 GRX2YDR513W 432 nt3.32□□□□□ -1.88
RPT4P53549 LSM4YER112W 564 nt3.32□□□□□ -1.88
RPT4P53549 YGL117WYGL117W 798 nt3.32□□□□□ -1.88
RPT4P53549 PEF1YGR058W 1008 nt3.32□□□□□ -1.88
RPT4P53549 tW(CCA)G1tW(CCA)G1 72 nt3.32□□□□□ -1.88
RPT4P53549 RGI2YIL057C 495 nt3.32□□□□□ -1.88
RPT4P53549 tW(CCA)G2tW(CCA)G2 72 nt3.32□□□□□ -1.88
RPT4P53549 tW(CCA)JtW(CCA)J 72 nt3.32□□□□□ -1.88
RPT4P53549 tW(CCA)KtW(CCA)K 72 nt3.32□□□□□ -1.88
RPT4P53549 tW(CCA)MtW(CCA)M 72 nt3.32□□□□□ -1.88
RPT4P53549 tW(CCA)PtW(CCA)P 72 nt3.32□□□□□ -1.88
RPT4P53549 CMC1YKL137W 336 nt3.32□□□□□ -1.88
RPT4P53549 YLR285C-AYLR285C-A 171 nt3.32□□□□□ -1.88
RPT4P53549 DIA1YMR316W 1011 nt3.32□□□□□ -1.88
RPT4P53549 AI4Q0065 1671 nt3.32□□□□□ -1.88
RPT4P53549 SQS1YNL224C 2304 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 30.5 ms