Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.26■□□□□ 0.99
NUBP1P53384 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.26■□□□□ 0.99
NUBP1P53384 AL589743.5-201ENST00000616611 1050 ntBASIC21.26■□□□□ 0.99
NUBP1P53384 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
NUBP1P53384 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NUBP1P53384 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NUBP1P53384 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 KRT17P1-201ENST00000399211 1546 ntBASIC21.25■□□□□ 0.99
NUBP1P53384 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NUBP1P53384 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 POM121L13P-201ENST00000422362 380 ntBASIC21.25■□□□□ 0.99
NUBP1P53384 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.25■□□□□ 0.99
NUBP1P53384 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.25■□□□□ 0.99
NUBP1P53384 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.25■□□□□ 0.99
NUBP1P53384 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.25■□□□□ 0.99
NUBP1P53384 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.25■□□□□ 0.99
NUBP1P53384 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.25■□□□□ 0.99
NUBP1P53384 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC21.25■□□□□ 0.99
NUBP1P53384 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.25■□□□□ 0.99
NUBP1P53384 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NUBP1P53384 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUBP1P53384 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUBP1P53384 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
NUBP1P53384 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NUBP1P53384 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.24■□□□□ 0.99
NUBP1P53384 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUBP1P53384 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NUBP1P53384 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
NUBP1P53384 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC21.24■□□□□ 0.99
NUBP1P53384 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUBP1P53384 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUBP1P53384 FAM21FP-204ENST00000608637 956 ntBASIC21.24■□□□□ 0.99
NUBP1P53384 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.24■□□□□ 0.99
NUBP1P53384 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NUBP1P53384 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.23■□□□□ 0.99
NUBP1P53384 AC012497.1-201ENST00000429392 575 ntBASIC21.23■□□□□ 0.99
NUBP1P53384 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.23■□□□□ 0.99
NUBP1P53384 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.23■□□□□ 0.99
NUBP1P53384 AC133681.1-201ENST00000465482 601 ntBASIC21.23■□□□□ 0.99
NUBP1P53384 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.23■□□□□ 0.99
NUBP1P53384 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.23■□□□□ 0.99
NUBP1P53384 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.23■□□□□ 0.99
NUBP1P53384 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUBP1P53384 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.23■□□□□ 0.99
NUBP1P53384 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.23■□□□□ 0.99
NUBP1P53384 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.23■□□□□ 0.99
NUBP1P53384 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.23■□□□□ 0.99
NUBP1P53384 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.22■□□□□ 0.99
NUBP1P53384 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUBP1P53384 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NUBP1P53384 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUBP1P53384 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUBP1P53384 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUBP1P53384 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.22■□□□□ 0.99
NUBP1P53384 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUBP1P53384 PRKY-204ENST00000533551 1019 ntBASIC21.22■□□□□ 0.99
NUBP1P53384 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.22■□□□□ 0.99
NUBP1P53384 AC233263.1-201ENST00000578059 224 ntBASIC21.22■□□□□ 0.99
NUBP1P53384 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.22■□□□□ 0.99
NUBP1P53384 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.22■□□□□ 0.99
NUBP1P53384 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUBP1P53384 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUBP1P53384 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.22■□□□□ 0.99
NUBP1P53384 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.22■□□□□ 0.99
NUBP1P53384 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.22■□□□□ 0.99
NUBP1P53384 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUBP1P53384 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
NUBP1P53384 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUBP1P53384 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUBP1P53384 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.21■□□□□ 0.99
NUBP1P53384 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.21■□□□□ 0.99
NUBP1P53384 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUBP1P53384 AL049597.2-201ENST00000565575 961 ntBASIC21.21■□□□□ 0.99
NUBP1P53384 AC132872.1-201ENST00000566986 1195 ntBASIC21.21■□□□□ 0.99
NUBP1P53384 SOX15-203ENST00000570788 1093 ntBASIC21.21■□□□□ 0.99
NUBP1P53384 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.21■□□□□ 0.99
NUBP1P53384 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.21■□□□□ 0.99
NUBP1P53384 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUBP1P53384 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.21■□□□□ 0.99
NUBP1P53384 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NUBP1P53384 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms