Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CLK3P49761 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK3P49761 OXCT2P1-201ENST00000447263 1535 ntBASIC19.96■□□□□ 0.79
CLK3P49761 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK3P49761 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK3P49761 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK3P49761 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.95■□□□□ 0.78
CLK3P49761 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.95■□□□□ 0.78
CLK3P49761 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK3P49761 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.95■□□□□ 0.78
CLK3P49761 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.95■□□□□ 0.78
CLK3P49761 AC079089.2-201ENST00000531211 1277 ntBASIC19.95■□□□□ 0.78
CLK3P49761 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.95■□□□□ 0.78
CLK3P49761 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLK3P49761 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK3P49761 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK3P49761 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.95■□□□□ 0.78
CLK3P49761 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK3P49761 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.95■□□□□ 0.78
CLK3P49761 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLK3P49761 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CLK3P49761 AF106564.1-201ENST00000607058 2553 ntBASIC19.94■□□□□ 0.78
CLK3P49761 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 AL157384.1-201ENST00000445995 2473 ntBASIC19.94■□□□□ 0.78
CLK3P49761 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLK3P49761 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.94■□□□□ 0.78
CLK3P49761 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.94■□□□□ 0.78
CLK3P49761 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.94■□□□□ 0.78
CLK3P49761 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CLK3P49761 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 TSPY26P-201ENST00000476365 1326 ntBASIC19.94■□□□□ 0.78
CLK3P49761 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLK3P49761 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK3P49761 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.94■□□□□ 0.78
CLK3P49761 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.94■□□□□ 0.78
CLK3P49761 Z98882.1-201ENST00000622160 2253 ntBASIC19.93■□□□□ 0.78
CLK3P49761 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CLK3P49761 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLK3P49761 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLK3P49761 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CLK3P49761 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.93■□□□□ 0.78
CLK3P49761 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLK3P49761 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.93■□□□□ 0.78
CLK3P49761 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CLK3P49761 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLK3P49761 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLK3P49761 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLK3P49761 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLK3P49761 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLK3P49761 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CLK3P49761 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.92■□□□□ 0.78
CLK3P49761 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.92■□□□□ 0.78
CLK3P49761 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLK3P49761 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.92■□□□□ 0.78
CLK3P49761 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLK3P49761 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.92■□□□□ 0.78
CLK3P49761 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.92■□□□□ 0.78
CLK3P49761 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLK3P49761 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLK3P49761 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLK3P49761 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CLK3P49761 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CLK3P49761 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLK3P49761 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLK3P49761 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLK3P49761 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CLK3P49761 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CLK3P49761 FEM1AP4-201ENST00000443167 1987 ntBASIC19.92■□□□□ 0.78
CLK3P49761 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLK3P49761 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.91■□□□□ 0.78
CLK3P49761 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CLK3P49761 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CLK3P49761 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.91■□□□□ 0.78
CLK3P49761 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.91■□□□□ 0.78
CLK3P49761 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.91■□□□□ 0.78
CLK3P49761 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.91■□□□□ 0.78
CLK3P49761 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLK3P49761 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CLK3P49761 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms