Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CX3CR1P49238 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.55■□□□□ 0.56
CX3CR1P49238 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.55■□□□□ 0.56
CX3CR1P49238 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.55■□□□□ 0.56
CX3CR1P49238 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CX3CR1P49238 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.55■□□□□ 0.56
CX3CR1P49238 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.55■□□□□ 0.56
CX3CR1P49238 AC106739.1-201ENST00000617035 715 ntBASIC18.55■□□□□ 0.56
CX3CR1P49238 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CX3CR1P49238 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CX3CR1P49238 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CX3CR1P49238 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.55■□□□□ 0.56
CX3CR1P49238 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.54■□□□□ 0.56
CX3CR1P49238 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CX3CR1P49238 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CX3CR1P49238 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CX3CR1P49238 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CX3CR1P49238 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.54■□□□□ 0.56
CX3CR1P49238 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.54■□□□□ 0.56
CX3CR1P49238 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.54■□□□□ 0.56
CX3CR1P49238 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CX3CR1P49238 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CX3CR1P49238 AF106564.1-201ENST00000607058 2553 ntBASIC18.54■□□□□ 0.56
CX3CR1P49238 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.54■□□□□ 0.56
CX3CR1P49238 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.54■□□□□ 0.56
CX3CR1P49238 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.54■□□□□ 0.56
CX3CR1P49238 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CX3CR1P49238 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.54■□□□□ 0.56
CX3CR1P49238 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CX3CR1P49238 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.53■□□□□ 0.56
CX3CR1P49238 TSPY26P-201ENST00000476365 1326 ntBASIC18.53■□□□□ 0.56
CX3CR1P49238 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CX3CR1P49238 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
CX3CR1P49238 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.53■□□□□ 0.56
CX3CR1P49238 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.53■□□□□ 0.56
CX3CR1P49238 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CX3CR1P49238 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.53■□□□□ 0.56
CX3CR1P49238 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.53■□□□□ 0.56
CX3CR1P49238 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.53■□□□□ 0.56
CX3CR1P49238 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CX3CR1P49238 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.53■□□□□ 0.56
CX3CR1P49238 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CX3CR1P49238 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CX3CR1P49238 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CX3CR1P49238 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CX3CR1P49238 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CX3CR1P49238 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CX3CR1P49238 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CX3CR1P49238 EDA-201ENST00000338901 1233 ntBASIC18.52■□□□□ 0.56
CX3CR1P49238 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CX3CR1P49238 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.52■□□□□ 0.56
CX3CR1P49238 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.52■□□□□ 0.56
CX3CR1P49238 AP001330.3-201ENST00000520123 633 ntBASIC18.52■□□□□ 0.56
CX3CR1P49238 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CX3CR1P49238 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.52■□□□□ 0.55
CX3CR1P49238 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CX3CR1P49238 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CX3CR1P49238 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CX3CR1P49238 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.51■□□□□ 0.55
CX3CR1P49238 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CX3CR1P49238 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CX3CR1P49238 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CX3CR1P49238 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CX3CR1P49238 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CX3CR1P49238 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CX3CR1P49238 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CX3CR1P49238 AC110285.6-201ENST00000617652 491 ntBASIC18.51■□□□□ 0.55
CX3CR1P49238 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.51■□□□□ 0.55
CX3CR1P49238 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CX3CR1P49238 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CX3CR1P49238 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.5■□□□□ 0.55
CX3CR1P49238 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.5■□□□□ 0.55
CX3CR1P49238 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.5■□□□□ 0.55
CX3CR1P49238 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.5■□□□□ 0.55
CX3CR1P49238 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.5■□□□□ 0.55
CX3CR1P49238 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.5■□□□□ 0.55
CX3CR1P49238 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 AL355001.2-201ENST00000620617 1191 ntBASIC18.5■□□□□ 0.55
CX3CR1P49238 AC105233.4-201ENST00000642045 216 ntBASIC18.5■□□□□ 0.55
CX3CR1P49238 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CX3CR1P49238 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.5■□□□□ 0.55
CX3CR1P49238 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CX3CR1P49238 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CX3CR1P49238 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CX3CR1P49238 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.49■□□□□ 0.55
CX3CR1P49238 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.49■□□□□ 0.55
CX3CR1P49238 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.49■□□□□ 0.55
CX3CR1P49238 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms