Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.3■■□□□ 1
CSNK1DP48730 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSNK1DP48730 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.3■■□□□ 1
CSNK1DP48730 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CSNK1DP48730 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CSNK1DP48730 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.29■■□□□ 1
CSNK1DP48730 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1DP48730 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
CSNK1DP48730 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.29■■□□□ 1
CSNK1DP48730 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.29■■□□□ 1
CSNK1DP48730 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
CSNK1DP48730 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CSNK1DP48730 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CSNK1DP48730 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.29■■□□□ 1
CSNK1DP48730 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSNK1DP48730 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.29■■□□□ 1
CSNK1DP48730 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.29■■□□□ 1
CSNK1DP48730 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1DP48730 UBE2DNL-204ENST00000602536 740 ntBASIC21.29■■□□□ 1
CSNK1DP48730 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1DP48730 KRT16P2-201ENST00000414673 1423 ntBASIC21.29■■□□□ 1
CSNK1DP48730 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.29■■□□□ 1
CSNK1DP48730 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
CSNK1DP48730 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
CSNK1DP48730 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.28■■□□□ 1
CSNK1DP48730 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CSNK1DP48730 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.28■■□□□ 1
CSNK1DP48730 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.28■■□□□ 1
CSNK1DP48730 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.28■■□□□ 1
CSNK1DP48730 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 MYCNOS-205ENST00000641950 531 ntBASIC21.28■■□□□ 1
CSNK1DP48730 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1DP48730 AC244015.2-201ENST00000616358 1861 ntBASIC21.28■■□□□ 1
CSNK1DP48730 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CSNK1DP48730 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CSNK1DP48730 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.27■■□□□ 1
CSNK1DP48730 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSNK1DP48730 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.27■■□□□ 1
CSNK1DP48730 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSNK1DP48730 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.27■■□□□ 1
CSNK1DP48730 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CSNK1DP48730 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSNK1DP48730 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.27■■□□□ 1
CSNK1DP48730 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CSNK1DP48730 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.27■■□□□ 1
CSNK1DP48730 SLC7A5P2-201ENST00000553010 536 ntBASIC21.27■■□□□ 1
CSNK1DP48730 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.27■■□□□ 1
CSNK1DP48730 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.27■■□□□ 1
CSNK1DP48730 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.27■■□□□ 1
CSNK1DP48730 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.27■■□□□ 1
CSNK1DP48730 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.27■■□□□ 1
CSNK1DP48730 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.27■■□□□ 1
CSNK1DP48730 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSNK1DP48730 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CSNK1DP48730 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CSNK1DP48730 AC061975.6-201ENST00000579045 1553 ntBASIC21.27■□□□□ 0.99
CSNK1DP48730 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
CSNK1DP48730 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CSNK1DP48730 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.26■□□□□ 0.99
CSNK1DP48730 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.26■□□□□ 0.99
CSNK1DP48730 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.26■□□□□ 0.99
CSNK1DP48730 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1DP48730 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CSNK1DP48730 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.25■□□□□ 0.99
CSNK1DP48730 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.25■□□□□ 0.99
CSNK1DP48730 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
CSNK1DP48730 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1DP48730 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1DP48730 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1DP48730 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1DP48730 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.25■□□□□ 0.99
CSNK1DP48730 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.25■□□□□ 0.99
CSNK1DP48730 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1DP48730 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1DP48730 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1DP48730 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.25■□□□□ 0.99
CSNK1DP48730 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms