Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KCNC1P48547 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.76■□□□□ 0.91
KCNC1P48547 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
KCNC1P48547 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNC1P48547 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNC1P48547 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KCNC1P48547 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
KCNC1P48547 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNC1P48547 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KCNC1P48547 AC055733.4-201ENST00000638462 1354 ntBASIC20.75■□□□□ 0.91
KCNC1P48547 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNC1P48547 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNC1P48547 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KCNC1P48547 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KCNC1P48547 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.75■□□□□ 0.91
KCNC1P48547 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
KCNC1P48547 AL136967.2-201ENST00000623968 743 ntBASIC20.75■□□□□ 0.91
KCNC1P48547 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNC1P48547 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
KCNC1P48547 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KCNC1P48547 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNC1P48547 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNC1P48547 AL049796.1-201ENST00000565336 1766 ntBASIC20.74■□□□□ 0.91
KCNC1P48547 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNC1P48547 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KCNC1P48547 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.74■□□□□ 0.91
KCNC1P48547 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNC1P48547 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNC1P48547 AC027682.1-201ENST00000562846 899 ntBASIC20.74■□□□□ 0.91
KCNC1P48547 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNC1P48547 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.74■□□□□ 0.91
KCNC1P48547 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNC1P48547 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNC1P48547 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNC1P48547 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNC1P48547 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KCNC1P48547 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
KCNC1P48547 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 MIR939-201ENST00000401314 82 ntBASIC20.73■□□□□ 0.91
KCNC1P48547 AL355001.2-201ENST00000620617 1191 ntBASIC20.73■□□□□ 0.91
KCNC1P48547 AC105233.4-201ENST00000642045 216 ntBASIC20.73■□□□□ 0.91
KCNC1P48547 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KCNC1P48547 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNC1P48547 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNC1P48547 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KCNC1P48547 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KCNC1P48547 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNC1P48547 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KCNC1P48547 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNC1P48547 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNC1P48547 AF213884.3-201ENST00000563833 479 ntBASIC20.72■□□□□ 0.91
KCNC1P48547 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KCNC1P48547 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNC1P48547 AL157384.1-201ENST00000445995 2473 ntBASIC20.72■□□□□ 0.91
KCNC1P48547 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNC1P48547 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNC1P48547 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNC1P48547 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNC1P48547 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNC1P48547 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
KCNC1P48547 RASA4CP-201ENST00000424092 1398 ntBASIC20.72■□□□□ 0.91
KCNC1P48547 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KCNC1P48547 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.71■□□□□ 0.91
KCNC1P48547 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNC1P48547 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNC1P48547 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
KCNC1P48547 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.7■□□□□ 0.91
KCNC1P48547 AC009237.3-201ENST00000393279 1427 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms