Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GDNFP39905 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDNFP39905 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.33■□□□□ 0.53
GDNFP39905 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDNFP39905 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDNFP39905 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDNFP39905 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDNFP39905 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.33■□□□□ 0.53
GDNFP39905 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDNFP39905 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GDNFP39905 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.33■□□□□ 0.52
GDNFP39905 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.33■□□□□ 0.52
GDNFP39905 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GDNFP39905 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GDNFP39905 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDNFP39905 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDNFP39905 OXCT2P1-201ENST00000447263 1535 ntBASIC18.33■□□□□ 0.52
GDNFP39905 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDNFP39905 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
GDNFP39905 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
GDNFP39905 AL391422.3-201ENST00000603791 2761 ntBASIC18.32■□□□□ 0.52
GDNFP39905 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
GDNFP39905 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GDNFP39905 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDNFP39905 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.32■□□□□ 0.52
GDNFP39905 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.32■□□□□ 0.52
GDNFP39905 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDNFP39905 AC004687.1-201ENST00000579003 1625 ntBASIC18.32■□□□□ 0.52
GDNFP39905 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.32■□□□□ 0.52
GDNFP39905 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDNFP39905 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.32■□□□□ 0.52
GDNFP39905 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.32■□□□□ 0.52
GDNFP39905 AL512631.2-201ENST00000604634 923 ntBASIC18.32■□□□□ 0.52
GDNFP39905 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GDNFP39905 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDNFP39905 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDNFP39905 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GDNFP39905 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GDNFP39905 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDNFP39905 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
GDNFP39905 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDNFP39905 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
GDNFP39905 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GDNFP39905 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
GDNFP39905 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.31■□□□□ 0.52
GDNFP39905 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.31■□□□□ 0.52
GDNFP39905 AC104564.3-201ENST00000582367 638 ntBASIC18.31■□□□□ 0.52
GDNFP39905 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.31■□□□□ 0.52
GDNFP39905 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.31■□□□□ 0.52
GDNFP39905 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDNFP39905 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.31■□□□□ 0.52
GDNFP39905 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GDNFP39905 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
GDNFP39905 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDNFP39905 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDNFP39905 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDNFP39905 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.3■□□□□ 0.52
GDNFP39905 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDNFP39905 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.3■□□□□ 0.52
GDNFP39905 DUX4L4-201ENST00000566884 1269 ntBASIC18.3■□□□□ 0.52
GDNFP39905 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.3■□□□□ 0.52
GDNFP39905 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDNFP39905 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDNFP39905 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.3■□□□□ 0.52
GDNFP39905 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GDNFP39905 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.3■□□□□ 0.52
GDNFP39905 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.3■□□□□ 0.52
GDNFP39905 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GDNFP39905 AC026471.6-201ENST00000622954 1905 ntBASIC18.29■□□□□ 0.52
GDNFP39905 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDNFP39905 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDNFP39905 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDNFP39905 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GDNFP39905 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDNFP39905 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GDNFP39905 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDNFP39905 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.29■□□□□ 0.52
GDNFP39905 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.29■□□□□ 0.52
GDNFP39905 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.29■□□□□ 0.52
GDNFP39905 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.29■□□□□ 0.52
GDNFP39905 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GDNFP39905 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDNFP39905 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms