Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 SUP53tL(CAA)C 82 nt1.98□□□□□ -2.09
RPB11P38902 tL(CAA)DtL(CAA)D 82 nt1.98□□□□□ -2.09
RPB11P38902 tL(CAA)G1tL(CAA)G1 82 nt1.98□□□□□ -2.09
RPB11P38902 SUP54tL(CAA)G2 82 nt1.98□□□□□ -2.09
RPB11P38902 tL(CAA)G3tL(CAA)G3 82 nt1.98□□□□□ -2.09
RPB11P38902 tL(CAA)KtL(CAA)K 82 nt1.98□□□□□ -2.09
RPB11P38902 tL(CAA)LtL(CAA)L 82 nt1.98□□□□□ -2.09
RPB11P38902 tL(CAA)MtL(CAA)M 82 nt1.98□□□□□ -2.09
RPB11P38902 tL(CAA)NtL(CAA)N 82 nt1.98□□□□□ -2.09
RPB11P38902 YHR137C-AYHR137C-A 651 nt1.98□□□□□ -2.09
RPB11P38902 ILV5YLR355C 1188 nt1.98□□□□□ -2.09
RPB11P38902 RPS29AYLR388W 171 nt1.98□□□□□ -2.09
RPB11P38902 TIF34YMR146C 1044 nt1.98□□□□□ -2.09
RPB11P38902 YOR055WYOR055W 435 nt1.98□□□□□ -2.09
RPB11P38902 SSN2YDR443C 4263 nt1.98□□□□□ -2.09
RPB11P38902 RPN4YDL020C 1596 nt1.98□□□□□ -2.09
RPB11P38902 MCD1YDL003W 1701 nt1.97□□□□□ -2.09
RPB11P38902 BNI4YNL233W 2679 nt1.97□□□□□ -2.09
RPB11P38902 RDS2YPL133C 1341 nt1.97□□□□□ -2.09
RPB11P38902 KHA1YJL094C 2622 nt1.97□□□□□ -2.09
RPB11P38902 YDR340WYDR340W 303 nt1.97□□□□□ -2.09
RPB11P38902 YHR180W-AYHR180W-A 183 nt1.97□□□□□ -2.09
RPB11P38902 MRPL38YKL170W 417 nt1.97□□□□□ -2.09
RPB11P38902 SPC34YKR037C 888 nt1.97□□□□□ -2.09
RPB11P38902 SLI1YGR212W 1407 nt1.97□□□□□ -2.09
RPB11P38902 YNL011CYNL011C 1335 nt1.96□□□□□ -2.1
RPB11P38902 PDR1YGL013C 3207 nt1.96□□□□□ -2.1
RPB11P38902 PET191YJR034W 327 nt1.96□□□□□ -2.1
RPB11P38902 PEX17YNL214W 600 nt1.96□□□□□ -2.1
RPB11P38902 RPL25YOL127W 429 nt1.96□□□□□ -2.1
RPB11P38902 HSP10YOR020C 321 nt1.96□□□□□ -2.1
RPB11P38902 CNS1YBR155W 1158 nt1.96□□□□□ -2.1
RPB11P38902 SSD1YDR293C 3753 nt1.96□□□□□ -2.1
RPB11P38902 EAP1YKL204W 1899 nt1.96□□□□□ -2.1
RPB11P38902 FIR1YER032W 2631 nt1.96□□□□□ -2.1
RPB11P38902 YDR261W-BYDR261W-B 5313 nt1.96□□□□□ -2.1
RPB11P38902 YFL002W-AYFL002W-A 5313 nt1.96□□□□□ -2.1
RPB11P38902 YGR161W-BYGR161W-B 5313 nt1.96□□□□□ -2.1
RPB11P38902 YCL019WYCL019W 5313 nt1.96□□□□□ -2.1
RPB11P38902 NFI1YOR156C 2181 nt1.95□□□□□ -2.1
RPB11P38902 MRP10YDL045W-A 288 nt1.95□□□□□ -2.1
RPB11P38902 YER066C-AYER066C-A 501 nt1.95□□□□□ -2.1
RPB11P38902 SFH5YJL145W 885 nt1.95□□□□□ -2.1
RPB11P38902 YKL156C-AYKL156C-A 117 nt1.95□□□□□ -2.1
RPB11P38902 YMR316C-AYMR316C-A 312 nt1.95□□□□□ -2.1
RPB11P38902 COS1YNL336W 1146 nt1.95□□□□□ -2.1
RPB11P38902 ATG3YNR007C 933 nt1.95□□□□□ -2.1
RPB11P38902 ALG14YBR070C 714 nt1.95□□□□□ -2.1
RPB11P38902 TPS2YDR074W 2691 nt1.95□□□□□ -2.1
RPB11P38902 VPS64YDR200C 1815 nt1.95□□□□□ -2.1
RPB11P38902 NEL1YHR035W 1893 nt1.94□□□□□ -2.1
RPB11P38902 STH1YIL126W 4080 nt1.94□□□□□ -2.1
RPB11P38902 YIL080WYIL080W 4722 nt1.94□□□□□ -2.1
RPB11P38902 YCR007CYCR007C 720 nt1.94□□□□□ -2.1
RPB11P38902 YRB1YDR002W 606 nt1.94□□□□□ -2.1
RPB11P38902 ERV14YGL054C 417 nt1.94□□□□□ -2.1
RPB11P38902 YGR039WYGR039W 312 nt1.94□□□□□ -2.1
RPB11P38902 ARC15YIL062C 465 nt1.94□□□□□ -2.1
RPB11P38902 DCG1YIR030C 735 nt1.94□□□□□ -2.1
RPB11P38902 MRT4YKL009W 711 nt1.94□□□□□ -2.1
RPB11P38902 RPL15AYLR029C 615 nt1.94□□□□□ -2.1
RPB11P38902 VMA6YLR447C 1038 nt1.94□□□□□ -2.1
RPB11P38902 SWA2YDR320C 2007 nt1.94□□□□□ -2.1
RPB11P38902 YKL075CYKL075C 1353 nt1.94□□□□□ -2.1
RPB11P38902 USO1YDL058W 5373 nt1.94□□□□□ -2.1
RPB11P38902 HFM1YGL251C 3564 nt1.93□□□□□ -2.1
RPB11P38902 YCL076WYCL076W 744 nt1.93□□□□□ -2.1
RPB11P38902 MCM21YDR318W 1107 nt1.93□□□□□ -2.1
RPB11P38902 AYR1YIL124W 894 nt1.93□□□□□ -2.1
RPB11P38902 TTI2YJR136C 1266 nt1.93□□□□□ -2.1
RPB11P38902 YOR062CYOR062C 807 nt1.93□□□□□ -2.1
RPB11P38902 SWD3YBR175W 948 nt1.93□□□□□ -2.1
RPB11P38902 YJL132WYJL132W 2253 nt1.93□□□□□ -2.1
RPB11P38902 SKO1YNL167C 1944 nt1.93□□□□□ -2.1
RPB11P38902 IRC8YJL051W 2469 nt1.93□□□□□ -2.1
RPB11P38902 YOL057WYOL057W 2136 nt1.93□□□□□ -2.1
RPB11P38902 EDS1YBR033W 2760 nt1.93□□□□□ -2.1
RPB11P38902 NMA111YNL123W 2994 nt1.92□□□□□ -2.1
RPB11P38902 TOR2YKL203C 7425 nt1.92□□□□□ -2.1
RPB11P38902 TIM9YEL020W-A 264 nt1.92□□□□□ -2.1
RPB11P38902 ERG25YGR060W 930 nt1.92□□□□□ -2.1
RPB11P38902 YGR111WYGR111W 1203 nt1.92□□□□□ -2.1
RPB11P38902 YLR012CYLR012C 300 nt1.92□□□□□ -2.1
RPB11P38902 YLR347W-AYLR347W-A 141 nt1.92□□□□□ -2.1
RPB11P38902 ANT1YPR128C 987 nt1.92□□□□□ -2.1
RPB11P38902 SEC59YMR013C 1560 nt1.92□□□□□ -2.1
RPB11P38902 PDR11YIL013C 4236 nt1.92□□□□□ -2.1
RPB11P38902 RNY1YPL123C 1305 nt1.91□□□□□ -2.1
RPB11P38902 YDL199CYDL199C 2064 nt1.91□□□□□ -2.1
RPB11P38902 ITT1YML068W 1395 nt1.91□□□□□ -2.1
RPB11P38902 YDL050CYDL050C 372 nt1.91□□□□□ -2.1
RPB11P38902 YGL041W-AYGL041W-A 465 nt1.91□□□□□ -2.1
RPB11P38902 YGR026WYGR026W 837 nt1.91□□□□□ -2.1
RPB11P38902 YKL033W-AYKL033W-A 711 nt1.91□□□□□ -2.1
RPB11P38902 YLL044WYLL044W 447 nt1.91□□□□□ -2.1
RPB11P38902 ERV41YML067C 1059 nt1.91□□□□□ -2.1
RPB11P38902 TRM112YNR046W 408 nt1.91□□□□□ -2.1
RPB11P38902 YOR283WYOR283W 693 nt1.91□□□□□ -2.1
RPB11P38902 SCD5YOR329C 2619 nt1.91□□□□□ -2.1
RPB11P38902 DNF1YER166W 4716 nt1.91□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 37.7 ms