Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHKAP35790 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHKAP35790 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CHKAP35790 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.3■■□□□ 1.16
CHKAP35790 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.3■■□□□ 1.16
CHKAP35790 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHKAP35790 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHKAP35790 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHKAP35790 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHKAP35790 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.3■■□□□ 1.16
CHKAP35790 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHKAP35790 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.29■■□□□ 1.16
CHKAP35790 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.29■■□□□ 1.16
CHKAP35790 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.29■■□□□ 1.16
CHKAP35790 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.29■■□□□ 1.16
CHKAP35790 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.29■■□□□ 1.16
CHKAP35790 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.29■■□□□ 1.16
CHKAP35790 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 AC005224.4-201ENST00000583262 1652 ntBASIC22.29■■□□□ 1.16
CHKAP35790 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.29■■□□□ 1.16
CHKAP35790 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CHKAP35790 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHKAP35790 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHKAP35790 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHKAP35790 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHKAP35790 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHKAP35790 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.28■■□□□ 1.16
CHKAP35790 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.28■■□□□ 1.16
CHKAP35790 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.28■■□□□ 1.16
CHKAP35790 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.28■■□□□ 1.16
CHKAP35790 IKBKGP1-201ENST00000612193 1073 ntBASIC22.28■■□□□ 1.16
CHKAP35790 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.28■■□□□ 1.16
CHKAP35790 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.28■■□□□ 1.16
CHKAP35790 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CHKAP35790 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.28■■□□□ 1.16
CHKAP35790 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.28■■□□□ 1.16
CHKAP35790 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.28■■□□□ 1.16
CHKAP35790 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHKAP35790 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHKAP35790 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
CHKAP35790 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHKAP35790 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHKAP35790 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHKAP35790 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CHKAP35790 AC079140.4-201ENST00000507448 529 ntBASIC22.27■■□□□ 1.16
CHKAP35790 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.27■■□□□ 1.16
CHKAP35790 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.27■■□□□ 1.16
CHKAP35790 OR7E47P-201ENST00000546390 1422 ntBASIC22.27■■□□□ 1.16
CHKAP35790 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.27■■□□□ 1.16
CHKAP35790 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
CHKAP35790 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHKAP35790 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHKAP35790 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.27■■□□□ 1.16
CHKAP35790 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CHKAP35790 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CHKAP35790 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.26■■□□□ 1.15
CHKAP35790 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.26■■□□□ 1.15
CHKAP35790 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.26■■□□□ 1.15
CHKAP35790 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.26■■□□□ 1.15
CHKAP35790 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.26■■□□□ 1.15
CHKAP35790 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 AP004607.4-201ENST00000530158 1459 ntBASIC22.26■■□□□ 1.15
CHKAP35790 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.26■■□□□ 1.15
CHKAP35790 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHKAP35790 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.25■■□□□ 1.15
CHKAP35790 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.25■■□□□ 1.15
CHKAP35790 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.25■■□□□ 1.15
CHKAP35790 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
CHKAP35790 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.25■■□□□ 1.15
CHKAP35790 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHKAP35790 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms