Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YBR178WYBR178W 375 nt4.53□□□□□ -1.68
PUB1P32588 FHL1YPR104C 2811 nt4.53□□□□□ -1.68
PUB1P32588 GEM1YAL048C 1989 nt4.53□□□□□ -1.68
PUB1P32588 RTC5YOR118W 1704 nt4.52□□□□□ -1.69
PUB1P32588 YJR015WYJR015W 1533 nt4.52□□□□□ -1.69 RIP-Chip
PUB1P32588 SOG2YOR353C 2376 nt4.52□□□□□ -1.69
PUB1P32588 ERV1YGR029W 570 nt4.52□□□□□ -1.69
PUB1P32588 TRX2YGR209C 315 nt4.52□□□□□ -1.69 RIP-Chip
PUB1P32588 RPL17BYJL177W 555 nt4.52□□□□□ -1.69
PUB1P32588 REE1YJL217W 597 nt4.52□□□□□ -1.69
PUB1P32588 LSM8YJR022W 330 nt4.52□□□□□ -1.69
PUB1P32588 AFB1YLR040C 675 nt4.52□□□□□ -1.69 RIP-Chip
PUB1P32588 CDC33YOL139C 642 nt4.52□□□□□ -1.69
PUB1P32588 YOR318CYOR318C 306 nt4.52□□□□□ -1.69
PUB1P32588 YAP1YML007W 1953 nt4.52□□□□□ -1.69 RIP-Chip
PUB1P32588 VHR1YIL056W 1923 nt4.52□□□□□ -1.69 RIP-Chip
PUB1P32588 VPS1YKR001C 2115 nt4.51□□□□□ -1.69
PUB1P32588 MEF1YLR069C 2286 nt4.51□□□□□ -1.69
PUB1P32588 CNL1YDR357C 369 nt4.51□□□□□ -1.69 RIP-Chip
PUB1P32588 TFB3YDR460W 966 nt4.51□□□□□ -1.69 RIP-Chip
PUB1P32588 YKL065W-AYKL065W-A 222 nt4.51□□□□□ -1.69
PUB1P32588 YKL070WYKL070W 510 nt4.51□□□□□ -1.69
PUB1P32588 YLR466C-BYLR466C-B 117 nt4.51□□□□□ -1.69
PUB1P32588 ISF1YMR081C 1017 nt4.51□□□□□ -1.69
PUB1P32588 YNL296WYNL296W 315 nt4.51□□□□□ -1.69
PUB1P32588 RPS11BYBR048W 471 nt4.51□□□□□ -1.69
PUB1P32588 YPL135C-AYPL135C-A 174 nt4.51□□□□□ -1.69
PUB1P32588 YPL152W-AYPL152W-A 99 nt4.51□□□□□ -1.69
PUB1P32588 snR17bsnR17b 332 nt4.51□□□□□ -1.69
PUB1P32588 ASI3YNL008C 2031 nt4.51□□□□□ -1.69 RIP-Chip
PUB1P32588 GAT2YMR136W 1683 nt4.51□□□□□ -1.69 RIP-Chip
PUB1P32588 AAP1YHR047C 2571 nt4.51□□□□□ -1.69
PUB1P32588 PHO90YJL198W 2646 nt4.5□□□□□ -1.69
PUB1P32588 GCN20YFR009W 2259 nt4.5□□□□□ -1.69
PUB1P32588 ISD11YER048W-A 285 nt4.5□□□□□ -1.69 RIP-Chip
PUB1P32588 YGR151CYGR151C 336 nt4.5□□□□□ -1.69
PUB1P32588 YHR182C-AYHR182C-A 474 nt4.5□□□□□ -1.69
PUB1P32588 EFB1YAL003W 621 nt4.5□□□□□ -1.69
PUB1P32588 YJR012CYJR012C 624 nt4.5□□□□□ -1.69 RIP-Chip
PUB1P32588 YLR031WYLR031W 561 nt4.5□□□□□ -1.69
PUB1P32588 YAR075WYAR075W 474 nt4.5□□□□□ -1.69
PUB1P32588 BET5YML077W 480 nt4.5□□□□□ -1.69 RIP-Chip
PUB1P32588 YNL184CYNL184C 327 nt4.5□□□□□ -1.69 RIP-Chip
PUB1P32588 MDL1YLR188W 2088 nt4.5□□□□□ -1.69
PUB1P32588 YJL206CYJL206C 2277 nt4.49□□□□□ -1.69
PUB1P32588 VPS33YLR396C 2076 nt4.49□□□□□ -1.69 RIP-Chip
PUB1P32588 SER33YIL074C 1410 nt4.49□□□□□ -1.69
PUB1P32588 TDA7YNL176C 1911 nt4.49□□□□□ -1.69 RIP-Chip
PUB1P32588 RRP45YDR280W 918 nt4.49□□□□□ -1.69
PUB1P32588 YGR265WYGR265W 411 nt4.49□□□□□ -1.69
PUB1P32588 YBR032WYBR032W 303 nt4.49□□□□□ -1.69
PUB1P32588 AFT2YPL202C 1251 nt4.49□□□□□ -1.69
PUB1P32588 NGL3YML118W 1518 nt4.49□□□□□ -1.69
PUB1P32588 BRE5YNR051C 1548 nt4.49□□□□□ -1.69 RIP-Chip
PUB1P32588 DAL5YJR152W 1632 nt4.49□□□□□ -1.69
PUB1P32588 STE5YDR103W 2754 nt4.48□□□□□ -1.69
PUB1P32588 YDL012CYDL012C 324 nt4.48□□□□□ -1.69
PUB1P32588 YDR431WYDR431W 312 nt4.48□□□□□ -1.69
PUB1P32588 YEL067CYEL067C 588 nt4.48□□□□□ -1.69
PUB1P32588 YJL015CYJL015C 285 nt4.48□□□□□ -1.69
PUB1P32588 THI12YNL332W 1023 nt4.48□□□□□ -1.69
PUB1P32588 YPR039WYPR039W 336 nt4.48□□□□□ -1.69
PUB1P32588 TPS3YMR261C 3165 nt4.48□□□□□ -1.69
PUB1P32588 ANR2YKL047W 1551 nt4.48□□□□□ -1.69
PUB1P32588 CDC5YMR001C 2118 nt4.48□□□□□ -1.69
PUB1P32588 SIS2YKR072C 1689 nt4.48□□□□□ -1.69
PUB1P32588 YNR063WYNR063W 1824 nt4.47□□□□□ -1.69
PUB1P32588 CHA4YLR098C 1947 nt4.47□□□□□ -1.69
PUB1P32588 LHP1YDL051W 828 nt4.47□□□□□ -1.69
PUB1P32588 YDR115WYDR115W 318 nt4.47□□□□□ -1.69
PUB1P32588 YFR052C-AYFR052C-A 306 nt4.47□□□□□ -1.69
PUB1P32588 YHL048C-AYHL048C-A 135 nt4.47□□□□□ -1.69
PUB1P32588 YLR269CYLR269C 351 nt4.47□□□□□ -1.69
PUB1P32588 VPS69YPR087W 321 nt4.47□□□□□ -1.69
PUB1P32588 SUE1YPR151C 621 nt4.47□□□□□ -1.69
PUB1P32588 POF1YCL047C 777 nt4.47□□□□□ -1.69
PUB1P32588 NDC1YML031W 1968 nt4.47□□□□□ -1.69
PUB1P32588 PDR10YOR328W 4695 nt4.47□□□□□ -1.69
PUB1P32588 GPB1YOR371C 2694 nt4.47□□□□□ -1.69
PUB1P32588 ERG4YGL012W 1422 nt4.46□□□□□ -1.69 RIP-Chip
PUB1P32588 BFR1YOR198C 1413 nt4.46□□□□□ -1.69 RIP-Chip
PUB1P32588 STE20YHL007C 2820 nt4.46□□□□□ -1.69
PUB1P32588 AXL2YIL140W 2472 nt4.46□□□□□ -1.7 RIP-Chip
PUB1P32588 ARP5YNL059C 2268 nt4.46□□□□□ -1.7
PUB1P32588 MTL1YGR023W 1656 nt4.46□□□□□ -1.7
PUB1P32588 YML096WYML096W 1578 nt4.46□□□□□ -1.7
PUB1P32588 YIR020C-BYIR020C-B 735 nt4.46□□□□□ -1.7
PUB1P32588 YPL107WYPL107W 747 nt4.46□□□□□ -1.7
PUB1P32588 snR36snR36 182 nt4.46□□□□□ -1.7
PUB1P32588 SWC4YGR002C 1431 nt4.46□□□□□ -1.7
PUB1P32588 TLC1TLC1 1301 nt4.46□□□□□ -1.7
PUB1P32588 SUP35YDR172W 2058 nt4.45□□□□□ -1.7
PUB1P32588 HRD1YOL013C 1656 nt4.45□□□□□ -1.7 RIP-Chip
PUB1P32588 TOG1YER184C 2385 nt4.45□□□□□ -1.7
PUB1P32588 YDR102CYDR102C 333 nt4.45□□□□□ -1.7
PUB1P32588 CYC7YEL039C 342 nt4.45□□□□□ -1.7 RIP-Chip
PUB1P32588 YER023C-AYER023C-A 213 nt4.45□□□□□ -1.7
PUB1P32588 YER038W-AYER038W-A 381 nt4.45□□□□□ -1.7
PUB1P32588 MTM1YGR257C 1101 nt4.45□□□□□ -1.7
PUB1P32588 UTP11YKL099C 753 nt4.45□□□□□ -1.7 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 29.6 ms