Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC30.3■■■□□ 2.44
CPS1P31327 PPOX-219ENST00000544598 813 ntTSL 2 BASIC30.3■■■□□ 2.44
CPS1P31327 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CPS1P31327 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC30.3■■■□□ 2.44
CPS1P31327 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CPS1P31327 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CPS1P31327 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CPS1P31327 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CPS1P31327 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CPS1P31327 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
CPS1P31327 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CPS1P31327 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.29■■■□□ 2.44
CPS1P31327 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CPS1P31327 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CPS1P31327 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CPS1P31327 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CPS1P31327 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC30.28■■■□□ 2.44
CPS1P31327 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CPS1P31327 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC30.28■■■□□ 2.44
CPS1P31327 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CPS1P31327 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CPS1P31327 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC30.27■■■□□ 2.44
CPS1P31327 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CPS1P31327 SPIB-206ENST00000596074 847 ntTSL 2 BASIC30.27■■■□□ 2.44
CPS1P31327 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
CPS1P31327 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CPS1P31327 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC30.27■■■□□ 2.44
CPS1P31327 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CPS1P31327 AC079089.2-201ENST00000531211 1277 ntBASIC30.27■■■□□ 2.44
CPS1P31327 AC012306.2-201ENST00000609350 630 ntBASIC30.27■■■□□ 2.44
CPS1P31327 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC30.26■■■□□ 2.44
CPS1P31327 ANOS2P-203ENST00000472227 1816 ntBASIC30.26■■■□□ 2.44
CPS1P31327 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CPS1P31327 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CPS1P31327 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CPS1P31327 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC30.26■■■□□ 2.43
CPS1P31327 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CPS1P31327 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CPS1P31327 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CPS1P31327 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC30.25■■■□□ 2.43
CPS1P31327 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CPS1P31327 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC30.25■■■□□ 2.43
CPS1P31327 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CPS1P31327 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC30.25■■■□□ 2.43
CPS1P31327 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CPS1P31327 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.25■■■□□ 2.43
CPS1P31327 AP006587.3-201ENST00000525742 1516 ntBASIC30.25■■■□□ 2.43
CPS1P31327 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC30.24■■■□□ 2.43
CPS1P31327 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC30.24■■■□□ 2.43
CPS1P31327 AC097493.4-201ENST00000641197 219 ntBASIC30.24■■■□□ 2.43
CPS1P31327 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
CPS1P31327 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CPS1P31327 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CPS1P31327 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC30.23■■■□□ 2.43
CPS1P31327 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
CPS1P31327 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CPS1P31327 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CPS1P31327 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CPS1P31327 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CPS1P31327 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CPS1P31327 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.22■■■□□ 2.43
CPS1P31327 HLA-B-256ENST00000639848 1089 ntBASIC30.22■■■□□ 2.43
CPS1P31327 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC30.22■■■□□ 2.43
CPS1P31327 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CPS1P31327 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CPS1P31327 AC087499.1-201ENST00000418141 1075 ntBASIC30.22■■■□□ 2.43
CPS1P31327 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CPS1P31327 RN7SL471P-201ENST00000580476 299 ntBASIC30.22■■■□□ 2.43
CPS1P31327 AC133561.5-201ENST00000635547 218 ntBASIC30.22■■■□□ 2.43
CPS1P31327 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CPS1P31327 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CPS1P31327 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CPS1P31327 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CPS1P31327 KRT18P35-201ENST00000510488 1269 ntBASIC30.21■■■□□ 2.43
CPS1P31327 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
CPS1P31327 AC069544.1-201ENST00000609399 999 ntBASIC30.21■■■□□ 2.43
CPS1P31327 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
CPS1P31327 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CPS1P31327 AP004607.7-201ENST00000527152 1677 ntBASIC30.2■■■□□ 2.43
CPS1P31327 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CPS1P31327 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CPS1P31327 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC30.2■■■□□ 2.42
CPS1P31327 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC30.2■■■□□ 2.42
CPS1P31327 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CPS1P31327 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.2■■■□□ 2.42
CPS1P31327 AL034346.1-201ENST00000568244 1277 ntBASIC30.2■■■□□ 2.42
CPS1P31327 AC233702.5-201ENST00000584107 538 ntBASIC30.2■■■□□ 2.42
CPS1P31327 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC30.2■■■□□ 2.42
CPS1P31327 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.2■■■□□ 2.42
CPS1P31327 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CPS1P31327 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CPS1P31327 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CPS1P31327 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC30.19■■■□□ 2.42
CPS1P31327 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC30.19■■■□□ 2.42
CPS1P31327 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC30.18■■■□□ 2.42
CPS1P31327 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC30.18■■■□□ 2.42
CPS1P31327 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CPS1P31327 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC30.18■■■□□ 2.42
CPS1P31327 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC30.18■■■□□ 2.42
CPS1P31327 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms