Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.2■□□□□ 0.66
GDF1P27539 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.2■□□□□ 0.66
GDF1P27539 CDCA4P2-201ENST00000441182 718 ntBASIC19.2■□□□□ 0.66
GDF1P27539 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.2■□□□□ 0.66
GDF1P27539 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.2■□□□□ 0.66
GDF1P27539 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GDF1P27539 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 AC120498.10-201ENST00000621827 505 ntBASIC19.2■□□□□ 0.66
GDF1P27539 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GDF1P27539 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.2■□□□□ 0.66
GDF1P27539 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.2■□□□□ 0.66
GDF1P27539 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 AC026471.6-201ENST00000622954 1905 ntBASIC19.19■□□□□ 0.66
GDF1P27539 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GDF1P27539 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.19■□□□□ 0.66
GDF1P27539 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 AC026185.1-201ENST00000445748 174 ntBASIC19.19■□□□□ 0.66
GDF1P27539 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.19■□□□□ 0.66
GDF1P27539 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.19■□□□□ 0.66
GDF1P27539 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.19■□□□□ 0.66
GDF1P27539 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.19■□□□□ 0.66
GDF1P27539 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDF1P27539 PKD1P6-201ENST00000343738 4769 ntBASIC19.18■□□□□ 0.66
GDF1P27539 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GDF1P27539 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.18■□□□□ 0.66
GDF1P27539 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.18■□□□□ 0.66
GDF1P27539 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GDF1P27539 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.18■□□□□ 0.66
GDF1P27539 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GDF1P27539 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GDF1P27539 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.18■□□□□ 0.66
GDF1P27539 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.18■□□□□ 0.66
GDF1P27539 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GDF1P27539 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF1P27539 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.17■□□□□ 0.66
GDF1P27539 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GDF1P27539 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.17■□□□□ 0.66
GDF1P27539 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.17■□□□□ 0.66
GDF1P27539 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
GDF1P27539 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 AC010542.4-201ENST00000563151 1910 ntBASIC19.17■□□□□ 0.66
GDF1P27539 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GDF1P27539 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.17■□□□□ 0.66
GDF1P27539 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDF1P27539 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.16■□□□□ 0.66
GDF1P27539 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GDF1P27539 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.16■□□□□ 0.66
GDF1P27539 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.16■□□□□ 0.66
GDF1P27539 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 POU5F1P4-201ENST00000413175 1085 ntBASIC19.16■□□□□ 0.66
GDF1P27539 AC006970.2-201ENST00000450065 779 ntBASIC19.16■□□□□ 0.66
GDF1P27539 SLC7A5P2-201ENST00000553010 536 ntBASIC19.16■□□□□ 0.66
GDF1P27539 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.16■□□□□ 0.66
GDF1P27539 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.16■□□□□ 0.66
GDF1P27539 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.16■□□□□ 0.66
GDF1P27539 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.16■□□□□ 0.66
GDF1P27539 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.16■□□□□ 0.66
GDF1P27539 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF1P27539 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GDF1P27539 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms