Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 YBL081WYBL081W 1107 nt2.94□□□□□ -1.94
VPS3P23643 HRT1YOL133W 366 nt2.94□□□□□ -1.94
VPS3P23643 CAF20YOR276W 486 nt2.94□□□□□ -1.94
VPS3P23643 YPR203WYPR203W 309 nt2.94□□□□□ -1.94
VPS3P23643 DBP7YKR024C 2229 nt2.94□□□□□ -1.94
VPS3P23643 BNA4YBL098W 1383 nt2.94□□□□□ -1.94
VPS3P23643 PCL2YDL127W 927 nt2.93□□□□□ -1.94
VPS3P23643 AIM11YER093C-A 414 nt2.93□□□□□ -1.94
VPS3P23643 EMC2YJR088C 879 nt2.93□□□□□ -1.94
VPS3P23643 SED5YLR026C 1023 nt2.93□□□□□ -1.94
VPS3P23643 YML037CYML037C 1023 nt2.93□□□□□ -1.94
VPS3P23643 ATP11YNL315C 957 nt2.93□□□□□ -1.94
VPS3P23643 DIM1YPL266W 957 nt2.93□□□□□ -1.94
VPS3P23643 HFM1YGL251C 3564 nt2.93□□□□□ -1.94
VPS3P23643 ECM29YHL030W 5607 nt2.92□□□□□ -1.94
VPS3P23643 YKL156C-AYKL156C-A 117 nt2.92□□□□□ -1.94
VPS3P23643 IAH1YOR126C 717 nt2.92□□□□□ -1.94
VPS3P23643 YCG1YDR325W 3108 nt2.92□□□□□ -1.94
VPS3P23643 TPO5YKL174C 1857 nt2.92□□□□□ -1.94
VPS3P23643 ATG13YPR185W 2217 nt2.92□□□□□ -1.94
VPS3P23643 YHR078WYHR078W 1659 nt2.92□□□□□ -1.94
VPS3P23643 BUB1YGR188C 3066 nt2.91□□□□□ -1.94
VPS3P23643 TOR1YJR066W 7413 nt2.91□□□□□ -1.94
VPS3P23643 GCD6YDR211W 2139 nt2.91□□□□□ -1.94
VPS3P23643 RPC17YJL011C 486 nt2.91□□□□□ -1.94
VPS3P23643 INP1YMR204C 1263 nt2.91□□□□□ -1.94
VPS3P23643 snR11snR11 258 nt2.91□□□□□ -1.94
VPS3P23643 SYC1YOR179C 567 nt2.91□□□□□ -1.94
VPS3P23643 YPL276WYPL276W 438 nt2.91□□□□□ -1.94
VPS3P23643 SRB8YCR081W 4284 nt2.9□□□□□ -1.94
VPS3P23643 YGR121W-AYGR121W-A 216 nt2.9□□□□□ -1.95
VPS3P23643 YKR033CYKR033C 426 nt2.9□□□□□ -1.95
VPS3P23643 DDI3YNL335W 678 nt2.9□□□□□ -1.95
VPS3P23643 SUR1YPL057C 1149 nt2.9□□□□□ -1.95
VPS3P23643 REG2YBR050C 1017 nt2.9□□□□□ -1.95
VPS3P23643 YPL107WYPL107W 747 nt2.9□□□□□ -1.95
VPS3P23643 TFC4YGR047C 3078 nt2.9□□□□□ -1.95
VPS3P23643 PSY2YNL201C 2577 nt2.9□□□□□ -1.95
VPS3P23643 JSN1YJR091C 3276 nt2.9□□□□□ -1.95
VPS3P23643 BEM4YPL161C 1902 nt2.89□□□□□ -1.95
VPS3P23643 CYR1YJL005W 6081 nt2.89□□□□□ -1.95
VPS3P23643 ECM18YDR125C 1362 nt2.89□□□□□ -1.95
VPS3P23643 TRM12YML005W 1389 nt2.89□□□□□ -1.95
VPS3P23643 DNA2YHR164C 4569 nt2.89□□□□□ -1.95
VPS3P23643 HUL5YGL141W 2733 nt2.89□□□□□ -1.95
VPS3P23643 FIN1YDR130C 876 nt2.89□□□□□ -1.95
VPS3P23643 YDR491CYDR491C 492 nt2.89□□□□□ -1.95
VPS3P23643 SNX4YJL036W 1272 nt2.89□□□□□ -1.95
VPS3P23643 ATG27YJL178C 816 nt2.89□□□□□ -1.95
VPS3P23643 TDA8YAL064C-A 381 nt2.89□□□□□ -1.95
VPS3P23643 YLR076CYLR076C 423 nt2.89□□□□□ -1.95
VPS3P23643 BLS1YLR408C 369 nt2.89□□□□□ -1.95
VPS3P23643 GYL1YMR192W 2163 nt2.89□□□□□ -1.95
VPS3P23643 YPR078CYPR078C 1119 nt2.89□□□□□ -1.95
VPS3P23643 MRP2YPR166C 348 nt2.89□□□□□ -1.95
VPS3P23643 ARA1YBR149W 1035 nt2.89□□□□□ -1.95
VPS3P23643 SEC7YDR170C 6030 nt2.89□□□□□ -1.95
VPS3P23643 HBT1YDL223C 3141 nt2.88□□□□□ -1.95
VPS3P23643 ESL1YIL151C 3357 nt2.88□□□□□ -1.95
VPS3P23643 ARF1YDL192W 546 nt2.88□□□□□ -1.95
VPS3P23643 YER066C-AYER066C-A 501 nt2.88□□□□□ -1.95
VPS3P23643 YGR039WYGR039W 312 nt2.88□□□□□ -1.95
VPS3P23643 RSM26YJR101W 801 nt2.88□□□□□ -1.95
VPS3P23643 YLR339CYLR339C 552 nt2.88□□□□□ -1.95
VPS3P23643 NMA111YNL123W 2994 nt2.88□□□□□ -1.95
VPS3P23643 COS1YNL336W 1146 nt2.88□□□□□ -1.95
VPS3P23643 YBL096CYBL096C 309 nt2.88□□□□□ -1.95
VPS3P23643 MPD2YOL088C 834 nt2.88□□□□□ -1.95
VPS3P23643 YOR062CYOR062C 807 nt2.88□□□□□ -1.95
VPS3P23643 MCA1YOR197W 1299 nt2.88□□□□□ -1.95
VPS3P23643 YOR365CYOR365C 2112 nt2.88□□□□□ -1.95
VPS3P23643 snR34snR34 203 nt2.88□□□□□ -1.95
VPS3P23643 CBP2YHL038C 1893 nt2.88□□□□□ -1.95
VPS3P23643 TCB2YNL087W 3537 nt2.88□□□□□ -1.95
VPS3P23643 PLM2YDR501W 1566 nt2.87□□□□□ -1.95
VPS3P23643 ERG11YHR007C 1593 nt2.87□□□□□ -1.95
VPS3P23643 YPL216WYPL216W 3309 nt2.87□□□□□ -1.95
VPS3P23643 YBL005W-BYBL005W-B 5268 nt2.87□□□□□ -1.95
VPS3P23643 GYP7YDL234C 2241 nt2.87□□□□□ -1.95
VPS3P23643 YHR086W-AYHR086W-A 162 nt2.87□□□□□ -1.95
VPS3P23643 tW(CCA)G1tW(CCA)G1 72 nt2.87□□□□□ -1.95
VPS3P23643 tW(CCA)G2tW(CCA)G2 72 nt2.87□□□□□ -1.95
VPS3P23643 tW(CCA)JtW(CCA)J 72 nt2.87□□□□□ -1.95
VPS3P23643 tW(CCA)KtW(CCA)K 72 nt2.87□□□□□ -1.95
VPS3P23643 tW(CCA)MtW(CCA)M 72 nt2.87□□□□□ -1.95
VPS3P23643 tW(CCA)PtW(CCA)P 72 nt2.87□□□□□ -1.95
VPS3P23643 YJR020WYJR020W 333 nt2.87□□□□□ -1.95
VPS3P23643 CPR7YJR032W 1182 nt2.87□□□□□ -1.95
VPS3P23643 YSA1YBR111C 696 nt2.87□□□□□ -1.95
VPS3P23643 YBR116CYBR116C 528 nt2.87□□□□□ -1.95
VPS3P23643 ADY4YLR227C 1482 nt2.87□□□□□ -1.95
VPS3P23643 SKT5YBL061C 2091 nt2.87□□□□□ -1.95
VPS3P23643 SOK1YDR006C 2706 nt2.87□□□□□ -1.95
VPS3P23643 MSS4YDR208W 2340 nt2.87□□□□□ -1.95
VPS3P23643 CEP3YMR168C 1827 nt2.86□□□□□ -1.95
VPS3P23643 UTP14YML093W 2700 nt2.86□□□□□ -1.95
VPS3P23643 RGR1YLR071C 3249 nt2.86□□□□□ -1.95
VPS3P23643 HTA1YDR225W 399 nt2.86□□□□□ -1.95
VPS3P23643 HPA3YEL066W 540 nt2.86□□□□□ -1.95
VPS3P23643 PMI40YER003C 1290 nt2.86□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms