Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RAB3BP20337 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RAB3BP20337 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB3BP20337 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB3BP20337 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RAB3BP20337 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAB3BP20337 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB3BP20337 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RAB3BP20337 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB3BP20337 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3BP20337 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RAB3BP20337 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3BP20337 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3BP20337 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3BP20337 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.48■□□□□ 0.55
RAB3BP20337 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3BP20337 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3BP20337 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3BP20337 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3BP20337 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3BP20337 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAB3BP20337 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB3BP20337 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB3BP20337 AL391422.3-201ENST00000603791 2761 ntBASIC18.47■□□□□ 0.55
RAB3BP20337 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB3BP20337 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RAB3BP20337 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB3BP20337 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
RAB3BP20337 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB3BP20337 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB3BP20337 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB3BP20337 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB3BP20337 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB3BP20337 AP005212.1-201ENST00000581547 1997 ntBASIC18.47■□□□□ 0.55
RAB3BP20337 KRT8P33-201ENST00000508125 1423 ntBASIC18.47■□□□□ 0.55
RAB3BP20337 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB3BP20337 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB3BP20337 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB3BP20337 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB3BP20337 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB3BP20337 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB3BP20337 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB3BP20337 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
RAB3BP20337 BX664725.1-201ENST00000438252 379 ntBASIC18.46■□□□□ 0.55
RAB3BP20337 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB3BP20337 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB3BP20337 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB3BP20337 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB3BP20337 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB3BP20337 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB3BP20337 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB3BP20337 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
RAB3BP20337 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB3BP20337 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB3BP20337 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.46■□□□□ 0.54
RAB3BP20337 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB3BP20337 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RAB3BP20337 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB3BP20337 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RAB3BP20337 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB3BP20337 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 AL031848.2-201ENST00000607670 837 ntBASIC18.45■□□□□ 0.54
RAB3BP20337 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB3BP20337 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB3BP20337 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB3BP20337 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB3BP20337 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB3BP20337 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB3BP20337 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
RAB3BP20337 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
RAB3BP20337 AC006128.1-201ENST00000624704 1661 ntBASIC18.44■□□□□ 0.54
RAB3BP20337 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RAB3BP20337 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.44■□□□□ 0.54
RAB3BP20337 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB3BP20337 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB3BP20337 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RAB3BP20337 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB3BP20337 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB3BP20337 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB3BP20337 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB3BP20337 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.43■□□□□ 0.54
RAB3BP20337 AC073314.1-201ENST00000568729 2216 ntBASIC18.43■□□□□ 0.54
RAB3BP20337 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB3BP20337 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms