Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NCK1P16333 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NCK1P16333 AC003102.1-202ENST00000563394 1796 ntBASIC19.94■□□□□ 0.78
NCK1P16333 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCK1P16333 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.94■□□□□ 0.78
NCK1P16333 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCK1P16333 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCK1P16333 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCK1P16333 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCK1P16333 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCK1P16333 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCK1P16333 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.93■□□□□ 0.78
NCK1P16333 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.93■□□□□ 0.78
NCK1P16333 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 PCDHAC2-203ENST00000615316 3011 ntBASIC19.93■□□□□ 0.78
NCK1P16333 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
NCK1P16333 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.93■□□□□ 0.78
NCK1P16333 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.93■□□□□ 0.78
NCK1P16333 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.93■□□□□ 0.78
NCK1P16333 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCK1P16333 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.92■□□□□ 0.78
NCK1P16333 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.92■□□□□ 0.78
NCK1P16333 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NCK1P16333 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCK1P16333 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.91■□□□□ 0.78
NCK1P16333 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.91■□□□□ 0.78
NCK1P16333 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NCK1P16333 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
NCK1P16333 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
NCK1P16333 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NCK1P16333 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 AC099791.2-201ENST00000605725 427 ntBASIC19.91■□□□□ 0.78
NCK1P16333 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NCK1P16333 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCK1P16333 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.9■□□□□ 0.78
NCK1P16333 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.9■□□□□ 0.78
NCK1P16333 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.9■□□□□ 0.78
NCK1P16333 AC068587.7-201ENST00000641602 218 ntBASIC19.9■□□□□ 0.78
NCK1P16333 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NCK1P16333 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.9■□□□□ 0.78
NCK1P16333 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.9■□□□□ 0.78
NCK1P16333 AC073314.1-201ENST00000568729 2216 ntBASIC19.9■□□□□ 0.78
NCK1P16333 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCK1P16333 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCK1P16333 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCK1P16333 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.89■□□□□ 0.77
NCK1P16333 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NCK1P16333 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
NCK1P16333 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.89■□□□□ 0.77
NCK1P16333 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NCK1P16333 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.89■□□□□ 0.77
NCK1P16333 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NCK1P16333 MIR6724-1-201ENST00000616420 92 ntBASIC19.89■□□□□ 0.77
NCK1P16333 MIR6724-2-201ENST00000616483 92 ntBASIC19.89■□□□□ 0.77
NCK1P16333 MIR6724-4-201ENST00000617390 92 ntBASIC19.89■□□□□ 0.77
NCK1P16333 MIR6724-3-201ENST00000622482 92 ntBASIC19.89■□□□□ 0.77
NCK1P16333 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCK1P16333 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCK1P16333 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
NCK1P16333 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCK1P16333 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NCK1P16333 AC010141.3-201ENST00000456659 717 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms