Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRFP11831 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRFP11831 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRFP11831 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SRFP11831 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.65■■□□□ 1.06
SRFP11831 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SRFP11831 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.65■■□□□ 1.06
SRFP11831 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.65■■□□□ 1.06
SRFP11831 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRFP11831 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRFP11831 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
SRFP11831 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRFP11831 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRFP11831 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRFP11831 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SRFP11831 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SRFP11831 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.64■■□□□ 1.05
SRFP11831 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.64■■□□□ 1.05
SRFP11831 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.64■■□□□ 1.05
SRFP11831 AC060766.5-201ENST00000590539 871 ntBASIC21.64■■□□□ 1.05
SRFP11831 AC008403.3-201ENST00000598924 454 ntBASIC21.64■■□□□ 1.05
SRFP11831 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRFP11831 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRFP11831 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SRFP11831 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SRFP11831 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFP11831 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.63■■□□□ 1.05
SRFP11831 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.63■■□□□ 1.05
SRFP11831 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.63■■□□□ 1.05
SRFP11831 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SRFP11831 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.63■■□□□ 1.05
SRFP11831 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
SRFP11831 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFP11831 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFP11831 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFP11831 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.62■■□□□ 1.05
SRFP11831 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
SRFP11831 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFP11831 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFP11831 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFP11831 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFP11831 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFP11831 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.62■■□□□ 1.05
SRFP11831 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.62■■□□□ 1.05
SRFP11831 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.62■■□□□ 1.05
SRFP11831 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.62■■□□□ 1.05
SRFP11831 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.62■■□□□ 1.05
SRFP11831 HLA-B-256ENST00000639848 1089 ntBASIC21.62■■□□□ 1.05
SRFP11831 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFP11831 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRFP11831 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.61■■□□□ 1.05
SRFP11831 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRFP11831 KRT17P1-201ENST00000399211 1546 ntBASIC21.61■■□□□ 1.05
SRFP11831 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SRFP11831 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.61■■□□□ 1.05
SRFP11831 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRFP11831 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.61■■□□□ 1.05
SRFP11831 FAM197Y4-202ENST00000622692 608 ntBASIC21.61■■□□□ 1.05
SRFP11831 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.61■■□□□ 1.05
SRFP11831 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.61■■□□□ 1.05
SRFP11831 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.61■■□□□ 1.05
SRFP11831 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.61■■□□□ 1.05
SRFP11831 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SRFP11831 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SRFP11831 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SRFP11831 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRFP11831 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.6■■□□□ 1.05
SRFP11831 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.6■■□□□ 1.05
SRFP11831 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SRFP11831 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.6■■□□□ 1.05
SRFP11831 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.6■■□□□ 1.05
SRFP11831 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.6■■□□□ 1.05
SRFP11831 MIR4497-201ENST00000583208 89 ntBASIC21.6■■□□□ 1.05
SRFP11831 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.6■■□□□ 1.05
SRFP11831 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.6■■□□□ 1.05
SRFP11831 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.6■■□□□ 1.05
SRFP11831 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRFP11831 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SRFP11831 AC061975.6-201ENST00000579045 1553 ntBASIC21.6■■□□□ 1.05
SRFP11831 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRFP11831 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRFP11831 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRFP11831 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.59■■□□□ 1.05
SRFP11831 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRFP11831 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.59■■□□□ 1.05
SRFP11831 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.59■■□□□ 1.05
SRFP11831 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SRFP11831 AC100791.3-201ENST00000617619 330 ntBASIC21.59■■□□□ 1.05
SRFP11831 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SRFP11831 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SRFP11831 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.58■■□□□ 1.05
SRFP11831 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRFP11831 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SRFP11831 AL355472.2-201ENST00000422958 438 ntBASIC21.58■■□□□ 1.05
SRFP11831 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.58■■□□□ 1.05
SRFP11831 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SRFP11831 RPPH1-201ENST00000516869 333 ntBASIC21.58■■□□□ 1.05
SRFP11831 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.58■■□□□ 1.05
SRFP11831 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SRFP11831 FAM21FP-204ENST00000608637 956 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms